RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 XXYLT1Q8NBI6 393 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 CACTINQ8WUQ7 758 aaKnown RBP20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 SMARCE1Q969G3 411 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 MSLNLQ96KJ4 702 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 FNIP2Q9P278 1114 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 DPP7Q9UHL4 492 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 EXOC3O60645 756 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 TMEM191BP0C7N4 346 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 EPCAMP16422 314 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 RPL17P18621 184 aaKnown RBP20■□□□□ 0.79
PRPF40B-216ENST00000552301 KCNC3Q14003 757 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 SNRNP35Q16560 246 aaKnown RBP20■□□□□ 0.79
PRPF40B-216ENST00000552301 CD300LGQ6UXG3 332 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 ANKS3Q6ZW76 656 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 C12orf56Q8IXR9 622 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 EFCAB13Q8IY85 973 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 APPL2Q8NEU8 664 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 SUSD3Q96L08 255 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 FBXL18Q96ME1 805 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 DPP3Q9NY33 737 aa20■□□□□ 0.79
PRPF40B-216ENST00000552301 R3HCC1Q9Y3T6 440 aaKnown RBP20■□□□□ 0.79
PRPF40B-216ENST00000552301 CALUO43852 315 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 BMP1P13497 986 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 PAX3P23760 479 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 IGFBP6P24592 240 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 CLCN4P51793 760 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 C9orf57Q5W0N0 161 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 DSTYKQ6XUX3 929 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 RDH13Q8NBN7 331 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 SMRP1Q8NCR6 262 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 LNX1Q8TBB1 728 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 ADAMTS19Q8TE59 1207 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 SLC22A17Q8WUG5 538 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 ZNF560Q96MR9 790 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 GSDMAQ96QA5 445 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 FNBP1Q96RU3 617 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 COL25A1Q9BXS0 654 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 PDE11AQ9HCR9 933 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 VWA8A3KMH1 1905 aa19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 TCF20Q9UGU0 1960 aaKnown RBP19.99■□□□□ 0.79
PRPF40B-216ENST00000552301 ARHGEF37A1IGU5 675 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 GRXCR2A6NFK2 248 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 H7C4K7 107 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 PDXKO00764 312 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 MBTPS2O43462 519 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 PRPF40AO75400 957 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 IL9P15248 144 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 VARS2Q5ST30 1063 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 ZNF280DQ6N043 979 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 CES5AQ6NT32 575 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 USP37Q86T82 979 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 PALB2Q86YC2 1186 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 TMEM130Q8N3G9 435 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 GUF1Q8N442 669 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 ANKRD36BP1Q96IX9 119 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 APOL5Q9BWW9 433 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 GTPBP4Q9BZE4 634 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 SFXN1Q9H9B4 322 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 MAN1C1Q9NR34 630 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 TSHZ2Q9NRE2 1034 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 MTRRQ9UBK8 725 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 PCDHB8Q9UN66 801 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 MAPK8IP1Q9UQF2 711 aa19.98■□□□□ 0.79
PRPF40B-216ENST00000552301 TNNC2P02585 160 aa19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 TAF6P49848 677 aa19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 WNT7BP56706 349 aa19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 ELOA2Q8IYF1 753 aaPredicted RBP19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 GBP4Q96PP9 640 aa19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 UHRF1Q96T88 793 aaPredicted RBP19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 KCTD10Q9H3F6 313 aa19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 USP15Q9Y4E8 981 aaPredicted RBP19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 PCDHA5Q9Y5H7 936 aa19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 BACE2Q9Y5Z0 518 aa19.97■□□□□ 0.79
PRPF40B-216ENST00000552301 ANO9A1A5B4 782 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 PIRO00625 290 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 PPEF2O14830 753 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 C1RP00736 705 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 NR3C1P04150 777 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 DLATP10515 647 aaKnown RBP19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 ODC1P11926 461 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 PNPLA4P41247 253 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 ITIH3Q06033 890 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 CYP24A1Q07973 514 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 RARS2Q5T160 578 aaKnown RBP19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 SYCE2Q6PIF2 218 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 ERCC4Q92889 916 aaPredicted RBP19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 CCDC127Q96BQ5 260 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 CLSTN3Q9BQT9 956 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 MTMR12Q9C0I1 747 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 ITGA11Q9UKX5 1188 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 CDY1Q9Y6F8 540 aa19.96■□□□□ 0.79
PRPF40B-216ENST00000552301 M0QZQ0 153 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 TGM5O43548 720 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 ITGB3P05106 788 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 KRT19P08727 400 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 TNNI1P19237 187 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 POLR2BP30876 1174 aaKnown RBP19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 OR1D2P34982 312 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 AARSP49588 968 aaKnown RBP eCLIP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms