RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 CLCN4P51793 760 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 COPB1P53618 953 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 FKBP3Q00688 224 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 LRMPQ12912 555 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 KRT31Q15323 416 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 SYCP1Q15431 976 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 SLC5A5Q92911 643 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 TIPINQ9BVW5 301 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 NUCKS1Q9H1E3 243 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 ELAC1Q9H777 363 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 TBC1D22BQ9NU19 505 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 ZNHIT6Q9NWK9 470 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 KCNG1Q9UIX4 513 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 GSTTP1A0A1W2PQM5 241 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 MYMKA6NI61 221 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 IPO5O00410 1097 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 NCAM2O15394 837 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 CCNE2O96020 404 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 PLA2G4BP0C869 781 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 TNNT1P13805 278 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 KLRC2P26717 231 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 POLGP54098 1239 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 KRT76Q01546 638 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 SRSF5Q13243 272 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 EDRF1Q3B7T1 1238 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 FKBP15Q5T1M5 1219 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 RDM1Q8NG50 284 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 NACC1Q96RE7 527 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 ZNF577Q9BSK1 485 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 RPP25Q9BUL9 199 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 SRRTQ9BXP5 876 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 JPH1Q9HDC5 661 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 SLC9A2Q9UBY0 812 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 GINS2Q9Y248 185 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 NOC2LQ9Y3T9 749 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 GPSM3Q9Y4H4 160 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 CCDC195A0A1B0GUA6 201 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 A0A1W2PQJ5 194 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 MSH4O15457 936 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 SCP2P22307 547 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 ABCD1P33897 745 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 TCF7P36402 384 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 MARSP56192 900 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 BCAR1P56945 870 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 FAM189BP81408 668 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 CDK17Q00537 523 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 COL28A1Q2UY09 1125 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 TXLNBQ8N3L3 684 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 TC2NQ8N9U0 490 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 DNAJC19Q96DA6 116 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 ERGIC2Q96RQ1 377 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 HSD17B14Q9BPX1 270 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 INTS13Q9NVM9 706 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 MYO1AQ9UBC5 1043 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 ST3GAL5Q9UNP4 418 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 NFASCO94856 1347 aa13.04□□□□□ -0.32
RBFOX1-214ENST00000552089 ADAMTS20P59510 1910 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 INPPL1O15357 1258 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 HRO43593 1189 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 PSMD10O75832 226 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 RPL13P26373 211 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 ALDH7A1P49419 539 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 SLC12A3P55017 1021 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 ACTR2P61160 394 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 UBXN1Q04323 297 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 STK4Q13043 487 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 ALCAMQ13740 583 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 MCM6Q14566 821 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 EPHA7Q15375 998 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 FAM26FQ5R3K3 315 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 CEP135Q66GS9 1140 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 CYP26C1Q6V0L0 522 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 FAM43BQ6ZT52 329 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 TPRG1Q6ZUI0 275 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 CATSPER3Q86XQ3 398 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 FMNL3Q8IVF7 1028 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 FAM160A2Q8N612 972 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 TMEM174Q8WUU8 243 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 SEPT1Q8WYJ6 367 aa13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 SMG7Q92540 1137 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-214ENST00000552089 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms