RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 STIM1Q13586 685 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 SNRNP35Q16560 246 aaKnown RBP11.5□□□□□ -0.57
PTCH1-225ENST00000551845 CAMK4Q16566 473 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 KIAA0319Q5VV43 1072 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 ISM2Q6H9L7 571 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 PDXDC1Q6P996 788 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 ADGRD2Q7Z7M1 963 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 SLC9A9Q8IVB4 645 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-225ENST00000551845 TMEM174Q8WUU8 243 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 PABPC5Q96DU9 382 aaKnown RBP11.5□□□□□ -0.57
PTCH1-225ENST00000551845 FNBP1Q96RU3 617 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 TTPALQ9BTX7 342 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 HERC2P3Q9BVR0 1158 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 VN1R3Q9BXE9 311 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 PDE11AQ9HCR9 933 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTCH1-225ENST00000551845 DPP3Q9NY33 737 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 CLDND1Q9NY35 253 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 FRMD4BQ9Y2L6 1034 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 PCDHGC5Q9Y5F6 944 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 MYH15Q9Y2K3 1946 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 LILRB3O75022 631 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 NR3C1P04150 777 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 NFICP08651 508 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 SRGAP2BP0DMP2 458 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 TNNI1P19237 187 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 MCM4P33991 863 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 PRCPP42785 496 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 BRCC3P46736 316 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 CREMQ03060 361 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 ADAM9Q13443 819 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 PTPN14Q15678 1187 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 DUSP6Q16828 381 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 DUOXA2Q1HG44 320 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 COBLL1Q53SF7 1204 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 CD300LGQ6UXG3 332 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-225ENST00000551845 PPFIBP1Q86W92 1011 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-225ENST00000551845 EFHBQ8N7U6 833 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 AUTS2Q8WXX7 1259 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-225ENST00000551845 ANKRD36BP1Q96IX9 119 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 KLHL5Q96PQ7 755 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 PHOX2BQ99453 314 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 DMAC2Q9NW81 257 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 TUBGCP4Q9UGJ1 667 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 MAN1B1Q9UKM7 699 aa11.49□□□□□ -0.57
PTCH1-225ENST00000551845 PIRO00625 290 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 SYN3O14994 580 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 CLASP2O75122 1294 aaKnown RBP11.48□□□□□ -0.57
PTCH1-225ENST00000551845 TNNC2P02585 160 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 TMEM191BP0C7N4 346 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 FGFR3P22607 806 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 IGFBP6P24592 240 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-225ENST00000551845 GTF2F1P35269 517 aaKnown RBP eCLIP11.48□□□□□ -0.57
PTCH1-225ENST00000551845 RBP5P82980 135 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 ZP2Q05996 745 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 PSMD6Q15008 389 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 NFIL3Q16649 462 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 C9orf57Q5W0N0 161 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 CEP135Q66GS9 1140 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 CENPPQ6IPU0 288 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 DSTYKQ6XUX3 929 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 ADSSL1Q8N142 457 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 CSGALNACT2Q8N6G5 542 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 TRIML1Q8N9V2 468 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 C3orf58Q8NDZ4 430 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 APPL2Q8NEU8 664 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 LNX1Q8TBB1 728 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-225ENST00000551845 CCDC127Q96BQ5 260 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-225ENST00000551845 TSG101Q99816 390 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 RXFP1Q9HBX9 757 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 INTS13Q9NVM9 706 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 PRKAG3Q9UGI9 489 aa11.48□□□□□ -0.57
PTCH1-225ENST00000551845 ANO9A1A5B4 782 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 ARHGEF37A1IGU5 675 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 H7C4K7 107 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 BIN1O00499 593 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 PSMA7O14818 248 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 CETN3O15182 167 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 TEX28O15482 410 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 ADH1AP07327 375 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 KRT19P08727 400 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 CNPP09543 421 aaKnown RBP11.47□□□□□ -0.57
PTCH1-225ENST00000551845 DLATP10515 647 aaKnown RBP11.47□□□□□ -0.57
PTCH1-225ENST00000551845 NR2F2P24468 414 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 PNPLA4P41247 253 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 NDUFV1P49821 464 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 GUCY2FP51841 1108 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 AP3M2P53677 418 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 PTPN5P54829 565 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 LILRA4P59901 499 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 FKBP3Q00688 224 aaKnown RBP11.47□□□□□ -0.57
PTCH1-225ENST00000551845 CYP24A1Q07973 514 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms