RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SRGAP1Q7Z6B7 1085 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 FAM90A1Q86YD7 464 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 FAM43AQ8N2R8 423 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 MB21D1Q8N884 522 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 ZBTB34Q8NCN2 500 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 OR10H5Q8NGA6 315 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 KLHDC4Q8TBB5 520 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 ZG16BQ96DA0 208 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 DCLRE1CQ96SD1 692 aaKnown RBP4.44□□□□□ -1.7
SCAF11-215ENST00000551391 LRFN3Q9BTN0 628 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 ZNF703Q9H7S9 590 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-215ENST00000551391 PNPOQ9NVS9 261 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 POGKQ9P215 609 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 RUVBL1Q9Y265 456 aaKnown RBP4.44□□□□□ -1.7
SCAF11-215ENST00000551391 PCDHA3Q9Y5H8 950 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 NR2E3Q9Y5X4 410 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 GRXCR1A8MXD5 290 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 FAM227AF5H4B4 570 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 ANXA1P04083 346 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 CD1AP06126 327 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 MAKP20794 623 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 HTR1BP28222 390 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 NANOS3P60323 173 aaKnown RBP4.43□□□□□ -1.7
SCAF11-215ENST00000551391 GPSM2P81274 684 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 CNGB1Q14028 1251 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-215ENST00000551391 PLS1Q14651 629 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 TMPRSS6Q8IU80 811 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 SYT12Q8IV01 421 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 KIAA0319LQ8IZA0 1049 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 IL17DQ8TAD2 202 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 PPP1R35Q8TAP8 253 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 MTFMTQ96DP5 389 aaKnown RBP4.43□□□□□ -1.7
SCAF11-215ENST00000551391 CCDC136Q96JN2 1154 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 MRPL46Q9H2W6 279 aaKnown RBP4.43□□□□□ -1.7
SCAF11-215ENST00000551391 GSTO2Q9H4Y5 243 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 FAM204AQ9H8W3 233 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 RLIMQ9NVW2 624 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 FBXO34Q9NWN3 711 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 JKAMPQ9P055 326 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 ABCF2Q9UG63 623 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 FEZ2Q9UHY8 353 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-215ENST00000551391 L1RE1Q9UN81 338 aa4.43□□□□□ -1.7
SCAF11-215ENST00000551391 TCRBV7S2A1N4TA0A589 114 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 H3BUI4 141 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 TRIM24O15164 1050 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 HAUS5O94927 633 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 ZBED1O96006 694 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 SBK3P0C264 359 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 GCSHP23434 173 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 SLC6A4P31645 630 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 USP14P54578 494 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 RAP2BP61225 183 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 RAB1AP62820 205 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 CRHR2Q13324 411 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 FGL2Q14314 439 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 GRM3Q14832 879 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 CCDC157Q569K6 752 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 FAM102AQ5T9C2 384 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-215ENST00000551391 EMC10Q5UCC4 262 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 NPNTQ6UXI9 565 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 UBE3BQ7Z3V4 1068 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 DAAM2Q86T65 1068 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 PDSS2Q86YH6 399 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 FITM2Q8N6M3 262 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 RNF169Q8NCN4 708 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 PLBD2Q8NHP8 589 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 ZNF483Q8TF39 744 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-215ENST00000551391 SLC35A4Q96G79 324 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 CRAMP1Q96RY5 1269 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 DDX20Q9UHI6 824 aaKnown RBP4.42□□□□□ -1.7
SCAF11-215ENST00000551391 ZDHHC8Q9ULC8 765 aa4.42□□□□□ -1.7
SCAF11-215ENST00000551391 REXO2Q9Y3B8 237 aaKnown RBP4.42□□□□□ -1.7
SCAF11-215ENST00000551391 LEFTY2O00292 366 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 KIAA0391O15091 583 aaKnown RBP4.41□□□□□ -1.7
SCAF11-215ENST00000551391 RECQL4O94761 1208 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 GNALP38405 381 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 PIK3CGP48736 1102 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 CHN2P52757 468 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 NHLH2Q02577 135 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 TOB2Q14106 344 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-215ENST00000551391 KIF22Q14807 665 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 CCDC93Q567U6 631 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 RABL3Q5HYI8 236 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 AGAP9Q5VTM2 703 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 ZNF365Q70YC5 407 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 MED25Q71SY5 747 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 RHOT2Q8IXI1 618 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 AOPEPQ8N6M6 819 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 BRIX1Q8TDN6 353 aaKnown RBP4.41□□□□□ -1.7
SCAF11-215ENST00000551391 NUP133Q8WUM0 1156 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 CACTINQ8WUQ7 758 aaKnown RBP4.41□□□□□ -1.7
SCAF11-215ENST00000551391 TTC17Q96AE7 1141 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 PACSIN1Q9BY11 444 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 B3GNT5Q9BYG0 378 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 REXO4Q9GZR2 422 aaKnown RBP4.41□□□□□ -1.7
SCAF11-215ENST00000551391 MMRN2Q9H8L6 949 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 DDX21Q9NR30 783 aaKnown RBP eCLIP4.41□□□□□ -1.7
SCAF11-215ENST00000551391 CFAP97Q9P2B7 532 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 CHST2Q9Y4C5 530 aa4.41□□□□□ -1.7
SCAF11-215ENST00000551391 FRMPD2Q68DX3 1309 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms