RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 HINFPQ9BQA5 517 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 ZSWIM1Q9BR11 485 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 NIF3L1Q9GZT8 377 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 XYLT2Q9H1B5 865 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 RPF1Q9H9Y2 349 aaKnown RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 SLC5A4Q9NY91 659 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 FLRT1Q9NZU1 646 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 HPCAL4Q9UM19 191 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 GNEQ9Y223 722 aaKnown RBP12.31□□□□□ -0.44
RAB5C-208ENST00000551338 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
RAB5C-208ENST00000551338 ZEB2O60315 1214 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 TSPAN1O60635 241 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-208ENST00000551338 TNNC2P02585 160 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 NFICP08651 508 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF865P0CJ78 1059 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-208ENST00000551338 TMOD1P28289 359 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 TNNT3P45378 269 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-208ENST00000551338 PTP4A2Q12974 167 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF211Q13398 564 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-208ENST00000551338 TRPC3Q13507 836 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 SMC1AQ14683 1233 aaKnown RBP12.3□□□□□ -0.44
RAB5C-208ENST00000551338 DGKDQ16760 1214 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 PRAMEF19Q5SWL8 479 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 CASKIN2Q8WXE0 1202 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 USP6NLQ92738 828 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 CYFIP2Q96F07 1278 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 AP1M1Q9BXS5 423 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 WNT8AQ9H1J5 351 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 PLEKHA4Q9H4M7 779 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 VIPAS39Q9H9C1 493 aa12.3□□□□□ -0.44
RAB5C-208ENST00000551338 CASP8AP2Q9UKL3 1982 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 LACTBL1A8MY62 500 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 KRIT1O00522 736 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 THAP12O43422 761 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 CLSTN1O94985 981 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 STAG3L1P0CL83 205 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 MYBL1P10243 752 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 RRM1P23921 792 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SSTR3P32745 418 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 CTNNA1P35221 906 aaKnown RBP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 ASPAP45381 313 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 PEX5P50542 639 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 EPHB4P54760 987 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 GUCY2DQ02846 1103 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 GABPB1Q06547 395 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 LLGL2Q6P1M3 1020 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 C17orf99Q6UX52 265 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SND1Q7KZF4 910 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF410Q86VK4 478 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 PHF13Q86YI8 300 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 PASD1Q8IV76 773 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 KIAA0319LQ8IZA0 1049 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 CPA5Q8WXQ8 436 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 KAT2BQ92831 832 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 LENG1Q96BZ8 264 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 C11orf70Q9BRQ4 267 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 DDX47Q9H0S4 455 aaKnown RBP12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SLITRK6Q9H5Y7 841 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 EPB41L5Q9HCM4 733 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 ERVK-5Q9HDB9 667 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SETD4Q9NVD3 440 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SIX4Q9UIU6 781 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 POLIQ9UNA4 740 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 NR2E1Q9Y466 385 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 SCN10AQ9Y5Y9 1956 aa12.29□□□□□ -0.44
RAB5C-208ENST00000551338 ESYT3A0FGR9 886 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 A6NJR5 290 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 DYNC1LI2O43237 492 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-208ENST00000551338 F2P00734 622 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 FGGP02679 453 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 SLC10A3P09131 477 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 CD58P19256 250 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 BRD2P25440 801 aaKnown RBP12.28□□□□□ -0.44
RAB5C-208ENST00000551338 NSFP46459 744 aaKnown RBP12.28□□□□□ -0.44
RAB5C-208ENST00000551338 CARSP49589 748 aaKnown RBP12.28□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF157P51786 506 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-208ENST00000551338 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-208ENST00000551338 PAK2Q13177 524 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 CCL14Q16627 93 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 SLC10A6Q3KNW5 377 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 JADE1Q6IE81 842 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 EMBQ6PCB8 327 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 SCARA5Q6ZMJ2 495 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 IFT20Q8IY31 132 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 UBL4BQ8N7F7 174 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms