RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 PTGDRQ13258 359 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 PLD1Q13393 1074 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 TRIM29Q14134 588 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 AASDHQ4L235 1098 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-212ENST00000550880 DGKKQ5KSL6 1271 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 HEATR6Q6AI08 1181 aaKnown RBP12.15□□□□□ -0.46
PFDN5-212ENST00000550880 ZNF280DQ6N043 979 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 HAUS6Q7Z4H7 955 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-212ENST00000550880 C3orf58Q8NDZ4 430 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 APPL2Q8NEU8 664 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 BSNDQ8WZ55 320 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 KIFAP3Q92845 792 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 MTMR9Q96QG7 549 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 POLR3CQ9BUI4 534 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-212ENST00000550880 TRPV4Q9HBA0 871 aa12.15□□□□□ -0.46
PFDN5-212ENST00000550880 AFF4Q9UHB7 1163 aaKnown RBP12.15□□□□□ -0.46
PFDN5-212ENST00000550880 HEPACAM2A8MVW5 462 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 CHADO15335 359 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 PFKFB2O60825 505 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 PAPSS2O95340 614 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-212ENST00000550880 SEC24AO95486 1093 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 CPB1P15086 417 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 IGFBP6P24592 240 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-212ENST00000550880 GRM5P41594 1212 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 CCR2P41597 374 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 POTEHQ6S545 545 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 CD300LGQ6UXG3 332 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 ACAP3Q96P50 834 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 FBXL5Q9UKA1 691 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 NOTCH4Q99466 2003 aa12.14□□□□□ -0.47
PFDN5-212ENST00000550880 PHLPP2Q6ZVD8 1323 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 VWA8A3KMH1 1905 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 DPYSL4O14531 572 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 GDF9O60383 454 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 MED24O75448 989 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 RPA1P27694 616 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 MCM4P33991 863 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 LIMK1P53667 647 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 OSTNP61366 133 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
PFDN5-212ENST00000550880 ANKRD1Q15327 319 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 TEAD2Q15562 447 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 NT5DC1Q5TFE4 455 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 HAUS3Q68CZ6 603 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 RALGPS2Q86X27 583 aaPredicted RBP12.13□□□□□ -0.47
PFDN5-212ENST00000550880 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 FAM160A2Q8N612 972 aaPredicted RBP12.13□□□□□ -0.47
PFDN5-212ENST00000550880 TNFRSF25Q93038 417 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 KIFC3Q9BVG8 833 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 OXCT2Q9BYC2 517 aaPredicted RBP12.13□□□□□ -0.47
PFDN5-212ENST00000550880 CEP72Q9P209 647 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 F5P12259 2224 aa12.13□□□□□ -0.47
PFDN5-212ENST00000550880 SLC38A8A6NNN8 435 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 CCDC169A6NNP5 214 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 BTBD18B2RXH4 712 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 K7ESF4 209 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 KCNE1P15382 129 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 GJA1P17302 382 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 MUTP22033 750 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 HOXA6P31267 233 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 MCM7P33993 719 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 EPHB3P54753 998 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 EPHA5P54756 1037 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 SOX4Q06945 474 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-212ENST00000550880 SRSF5Q13243 272 aaKnown RBP12.12□□□□□ -0.47
PFDN5-212ENST00000550880 GAS6Q14393 721 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 PTPAQ15257 358 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 XKR4Q5GH76 650 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 ALKAL1Q6UXT8 129 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 DIS3L2Q8IYB7 885 aaKnown RBP12.12□□□□□ -0.47
PFDN5-212ENST00000550880 DDX12PQ92771 950 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 LOXL4Q96JB6 756 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 SUSD3Q96L08 255 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
PFDN5-212ENST00000550880 TPCN1Q9ULQ1 816 aa12.12□□□□□ -0.47
PFDN5-212ENST00000550880 MYBPHLA2RUH7 354 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 SPECC1L-ADORA2AF8WAN1 911 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 ARNTLO00327 626 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-212ENST00000550880 AXIN1O15169 862 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 MOSPD3O75425 235 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 FGF19O95750 216 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 EDN1P05305 212 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 MCF2P10911 925 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 YWHAHQ04917 246 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-212ENST00000550880 FCHO2Q0JRZ9 810 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
PFDN5-212ENST00000550880 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 N4BP2L1Q5TBK1 243 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-212ENST00000550880 CACNA2D4Q7Z3S7 1137 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 SHKBP1Q8TBC3 707 aa12.11□□□□□ -0.47
PFDN5-212ENST00000550880 TBC1D32Q96NH3 1257 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms