RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
NR4A1-215ENST00000550557 ANKRD40Q6AI12 368 aa12.89□□□□□ -0.35
NR4A1-215ENST00000550557 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
NR4A1-215ENST00000550557 ARHGAP18Q8N392 663 aa12.89□□□□□ -0.35
NR4A1-215ENST00000550557 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■□□□ 14.4
NR4A1-215ENST00000550557 HDAC11Q96DB2 347 aa12.89□□□□□ -0.35
NR4A1-215ENST00000550557 RANBP17Q9H2T7 1088 aaKnown RBP12.89□□□□□ -0.35
NR4A1-215ENST00000550557 PPME1Q9Y570 386 aa12.89□□□□□ -0.35
NR4A1-215ENST00000550557 CCDC160A6NGH7 325 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CYP26A1O43174 497 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 WEE2P0C1S8 567 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.35
NR4A1-215ENST00000550557 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
NR4A1-215ENST00000550557 ALS2CLQ60I27 953 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 RBBP8NLQ8NC74 664 aaPredicted RBP12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 MUC3BQ9H195 1237 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CYP4F11Q9HBI6 524 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 EPB41L5Q9HCM4 733 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 IP6K2Q9UHH9 426 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 DSEQ9UL01 958 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 RGPD2P0DJD1 1756 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CARNS1A5YM72 827 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CASTOR2A6NHX0 329 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 BCAR1P56945 870 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 Q4G0T1 1027 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CES5AQ6NT32 575 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 VPS39Q96JC1 886 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 ADAM2Q99965 735 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 DAAM1Q9Y4D1 1078 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 LRRC53A6NM62 1247 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CYB561D2O14569 222 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 KRT3P12035 628 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 ACADSBP45954 432 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 VSNL1P62760 191 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 NAA25Q14CX7 972 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 NT5DC1Q5TFE4 455 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 CHSY1Q86X52 802 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 ALKBH8Q96BT7 664 aaKnown RBP12.88□□□□□ -0.35
NR4A1-215ENST00000550557 RMDN1Q96DB5 314 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 TLK1Q9UKI8 766 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 ZNF142P52746 1687 aaPredicted RBP12.88□□□□□ -0.35
NR4A1-215ENST00000550557 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 NPTX2P47972 431 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 TPI1P60174 286 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 MAGEB5Q9BZ81 275 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 MFSD1Q9H3U5 465 aa12.88□□□□□ -0.35
NR4A1-215ENST00000550557 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 FTLP02792 175 aaPredicted RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 MYL4P12829 197 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 MAGEA9P43362 315 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 RASSF2P50749 326 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 DRP2Q13474 957 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 AMHR2Q16671 573 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 UHMK1Q8TAS1 419 aaKnown RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 COPS5Q92905 334 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 KLC2Q9H0B6 622 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 NRCAMQ92823 1304 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 DFFAO00273 331 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 MED24O75448 989 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 ASMTLO95671 621 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 MYBL1P10243 752 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 PAMP19021 973 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 UBA1P22314 1058 aaKnown RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 GGCXP38435 758 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 IL31Q6EBC2 164 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 EMBQ6PCB8 327 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 RAD9BQ6WBX8 426 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 VSIG1Q86XK7 387 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 HDAC6Q9UBN7 1215 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 IPPQ9Y573 584 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 XYLBO75191 536 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 GYPCP04921 128 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 MBL2P11226 248 aaPredicted RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 PDGFRAP16234 1089 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 SLC7A5Q01650 507 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 TAP1Q03518 808 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 NIPA1Q7RTP0 329 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 RUSC1Q9BVN2 902 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 FMO5P49326 533 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 SFSWAPQ12872 951 aaKnown RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 STK4Q13043 487 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms