RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PAMP19021 973 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ZNF699Q32M78 642 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 WASHC2DQ5SRD0 308 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ZBTB41Q5SVQ8 909 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ARHGAP22Q7Z5H3 698 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 MFN1Q8IWA4 741 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 THNSL1Q8IYQ7 743 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 DDI1Q8WTU0 396 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ZBTB18Q99592 522 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 DBNDD1Q9H9R9 158 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 RGL1Q9NZL6 768 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 GGA2Q9UJY4 613 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 QARSP47897 775 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 C12orf60Q5U649 245 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 RBBP8NLQ8NC74 664 aaPredicted RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 TMA16Q96EY4 203 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 THAP2Q9H0W7 228 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SEMA4AQ9H3S1 761 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 PCMTD2Q9NV79 361 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 KBTBD4Q9NVX7 518 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 ATMINO43313 823 aaPredicted RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SERPINB9P50453 376 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 ALDH5A1P51649 535 aaPredicted RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 GEMIN4P57678 1058 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 TBCCQ15814 346 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 CC2D2BQ6DHV5 1058 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 ZNF507Q8TCN5 953 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 AIPL1Q9NZN9 384 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 XPO7Q9UIA9 1087 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 MYBP10242 640 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 COPAP53621 1224 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 NPEPPSP55786 919 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 DAB2P98082 770 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 INPP5AQ14642 412 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SMAD1Q15797 465 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SNX30Q5VWJ9 437 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 TMC3Q7Z5M5 1100 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SKA2Q8WVK7 121 aaPredicted RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 CPA5Q8WXQ8 436 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 OLFML3Q9NRN5 406 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SATB2Q9UPW6 733 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 RSPH10B2B2RC85 870 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 NEMP1O14524 444 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 AKAP10O43572 662 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 BBOX1O75936 387 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 APRTP07741 180 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 RSPH10BP0C881 870 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 CALB2P22676 271 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 PMLP29590 882 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 IZUMO2Q6UXV1 221 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 MTDHQ86UE4 582 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SCUBE1Q8IWY4 988 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 SIX6OS1Q8N1H7 587 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 GDF3Q9NR23 364 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 RAB6BQ9NRW1 208 aa16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 CNOT7Q9UIV1 285 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-212ENST00000550418 CCND2P30279 289 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 ACTR2P61160 394 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 NMD3Q96D46 503 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 SENP7Q9BQF6 1050 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 CAAP1Q9H8G2 361 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 SRRM3A6NNA2 597 aaPredicted RBP16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 H0Y626 953 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 TRIM16O95361 564 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 MRPL1Q9BYD6 325 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 SMAPO00193 183 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 STRNO43815 780 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 SRGAP2CP0DJJ0 459 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 GJB7Q6PEY0 223 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 EXOC8Q8IYI6 725 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 ATXN2LQ8WWM7 1075 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 ADNPQ9H2P0 1102 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 TBC1D22BQ9NU19 505 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 COL15A1P39059 1388 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 M0QZ92 97 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 KRT8P05787 483 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 HSPA13P48723 471 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 MTMR1Q13613 665 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 CENPPQ6IPU0 288 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 TTLL6Q8N841 843 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 WHRNQ9P202 907 aa16.6■□□□□ 0.25
RBFOX1-212ENST00000550418 F5H423 210 aaPredicted RBP16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 TMCC1O94876 653 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 FXR2P51116 673 aaKnown RBP eCLIP16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ATXN3P54252 364 aaPredicted RBP16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 TROAPQ12815 778 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ARHGEF6Q15052 776 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms