RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	FAXDC2	Q96IV6	333 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	UROC1	Q96N76	676 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	FAM193B	Q96PV7	902 aa	Predicted RBP	12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	PPP1R10	Q96QC0	940 aa	Known RBP	12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	GAN	Q9H2C0	597 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	MTIF3	Q9H2K0	278 aa	Known RBP	12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	TUBGCP4	Q9UGJ1	667 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	MYO6	Q9UM54	1294 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	AGAP1	Q9UPQ3	857 aa		12.5	□□□□□ -0.41
CNOT2-223	ENST00000550160	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	MEIS3P2	A8K0S8	358 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	OFD1	O75665	1012 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	STAU1	O95793	577 aa	Known RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	ASS1	P00966	412 aa	Known RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	FGB	P02675	491 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	CCDC172	P0C7W6	258 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	FGFR1	P11362	822 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	LRPAP1	P30533	357 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	RPL9	P32969	192 aa	Known RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	KRT9	P35527	623 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	MYL6	P60660	151 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	YWHAE	P62258	255 aa	Known RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	TNNC1	P63316	161 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	GCNT1	Q02742	428 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	TUSC3	Q13454	348 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	SV2C	Q496J9	727 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZNF667	Q5HYK9	610 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	SMYD5	Q6GMV2	418 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	CCDC186	Q7Z3E2	898 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	HELQ	Q8TDG4	1101 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	C18orf25	Q96B23	403 aa	Predicted RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	TRIM44	Q96DX7	344 aa	Predicted RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	HPDL	Q96IR7	371 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	FAM84A	Q96KN4	292 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	PI4K2A	Q9BTU6	479 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	TTYH3	Q9C0H2	523 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	NIF3L1	Q9GZT8	377 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	SIX2	Q9NPC8	291 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	NLRC4	Q9NPP4	1024 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	SIX4	Q9UIU6	781 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	DNAJC12	Q9UKB3	198 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	SCN5A	Q14524	2016 aa		12.49	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZBBX	A8MT70	800 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	EPHB6	O15197	1021 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	CST3	P01034	146 aa	Predicted RBP	12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	POMC	P01189	267 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	ACR	P10323	421 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	SYN1	P17600	705 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	PAX3	P23760	479 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	DEK	P35659	375 aa	Known RBP	12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	STAT1	P42224	750 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	TAF6	P49848	677 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	FXR1	P51114	621 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	TCTN1	Q2MV58	587 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	CLLU1OS	Q5K130	101 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	C9orf57	Q5W0N0	161 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	RRAGA	Q7L523	313 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	LRRC43	Q8N309	656 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	GSTCD	Q8NEC7	633 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	OR8K1	Q8NGG5	319 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	JAKMIP2	Q96AA8	810 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	PANX2	Q96RD6	677 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	STK33	Q9BYT3	514 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	VRTN	Q9H8Y1	702 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	FHOD1	Q9Y613	1164 aa		12.48	□□□□□ -0.41
CNOT2-223	ENST00000550160	ANK1	P16157	1881 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	ANO9	A1A5B4	782 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	ARHGEF37	A1IGU5	675 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	NOL4	O94818	638 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	UPP2	O95045	317 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	GUCY2F	P51841	1108 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	WDR5	P61964	334 aa	Known RBP	12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	CUL2	Q13617	745 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	ARHGAP44	Q17R89	818 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	WDR72	Q3MJ13	1102 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	SFMBT2	Q5VUG0	894 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	IQCE	Q6IPM2	695 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	PHLDB3	Q6NSJ2	640 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	PDXDC1	Q6P996	788 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	ZNF365	Q70YC5	407 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	OTOP2	Q7RTS6	562 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	ARHGEF19	Q8IW93	802 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	TTC39C	Q8N584	583 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	CCDC112	Q8NEF3	446 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	DNAI2	Q9GZS0	605 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	XYLT2	Q9H1B5	865 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	CXCL16	Q9H2A7	254 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.47	□□□□□ -0.41	7e-6	■■■■■ 74.5
CNOT2-223	ENST00000550160	ABHD10	Q9NUJ1	306 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	RNF19A	Q9NV58	838 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	TBC1D13	Q9NVG8	400 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	NXF1	Q9UBU9	619 aa	Known RBP	12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	PLAGL2	Q9UPG8	496 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	NUB1	Q9Y5A7	615 aa		12.47	□□□□□ -0.41
CNOT2-223	ENST00000550160	CARNS1	A5YM72	827 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	CASTOR2	A6NHX0	329 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms