RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PDXDC1Q6P996 788 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 DPH6Q7L8W6 267 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 JAKMIP2Q96AA8 810 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 NUP58Q9BVL2 599 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 OXCT2Q9BYC2 517 aaPredicted RBP10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 VPS16Q9H269 839 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 RC3H2Q9HBD1 1191 aaKnown RBP10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 RNF19AQ9NV58 838 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 RAB20Q9NX57 234 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 DSEQ9UL01 958 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 SSX2IPQ9Y2D8 614 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 FAN1Q9Y2M0 1017 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 NUB1Q9Y5A7 615 aa10.52□□□□□ -0.73
SMARCD1-206ENST00000549274 NLRC5Q86WI3 1866 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 A0A1B0GTH6 734 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 STK25O00506 426 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 PODXLO00592 558 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 HLA-DRAP01903 254 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 ITGB3P05106 788 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 RB1P06400 928 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 KRT19P08727 400 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 OR1G1P47890 313 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 GCLMP48507 274 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 MRE11P49959 708 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 TNNC1P63316 161 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 SMAD3P84022 425 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 KRT17Q04695 432 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 UBE3AQ05086 875 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 ZNF699Q32M78 642 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 PAN2Q504Q3 1202 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 HSP90AA4PQ58FG1 418 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 TDRD10Q5VZ19 366 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 C9orf57Q5W0N0 161 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 C15orf39Q6ZRI6 1047 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 COLGALT2Q8IYK4 626 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 C1orf127Q8N9H9 656 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 GSTCDQ8NEC7 633 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 ZSWIM2Q8NEG5 633 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 CLP1Q92989 425 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 ZMAT2Q96NC0 199 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 NT5C1BQ96P26 610 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 ERGIC2Q96RQ1 377 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 TRIM5Q9C035 493 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 RBSNQ9H1K0 784 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 HSD3B7Q9H2F3 369 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 TAB2Q9NYJ8 693 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 CXXC1Q9P0U4 656 aaPredicted RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 GCNT4Q9P109 453 aa10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 PUF60Q9UHX1 559 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 SF3B1O75533 1304 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMARCD1-206ENST00000549274 TMEM265A0A087WTH1 108 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 MEIS3P2A8K0S8 358 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 PIRO00625 290 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 TNRC18O15417 2968 aaPredicted RBP10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 TADA2AO75478 443 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 B3GAT3O94766 335 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 KIF4AO95239 1232 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 ASS1P00966 412 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 ODC1P11926 461 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 ATP1A3P13637 1013 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 POLR2BP30876 1174 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 BCAR1P56945 870 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 DLG4P78352 724 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 CREMQ03060 361 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 PPP3CAQ08209 521 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 NAB2Q15742 525 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 UPP1Q16831 310 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 EPC2Q52LR7 807 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 ZNF667Q5HYK9 610 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 MIIPQ5JXC2 388 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 C9orf50Q5SZB4 431 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 KCNT2Q6UVM3 1135 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 METTL23Q86XA0 190 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 GPR65Q8IYL9 337 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 TMEM86AQ8N2M4 240 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 APPL2Q8NEU8 664 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 NEK11Q8NG66 645 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 OR5B17Q8NGF7 314 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 PLEKHO2Q8TD55 490 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 TMEM169Q96HH4 297 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 HPDLQ96IR7 371 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 PCMTD1Q96MG8 357 aaPredicted RBP10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 EDEM3Q9BZQ6 932 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 NUCKS1Q9H1E3 243 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 NRDE2Q9H7Z3 1164 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 MMRN2Q9H8L6 949 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 CYP3A43Q9HB55 503 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 SLC24A3Q9HC58 644 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 PLCB1Q9NQ66 1216 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 GDAP2Q9NXN4 497 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 SPG21Q9NZD8 308 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 TUBGCP4Q9UGJ1 667 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 AGAP1Q9UPQ3 857 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 ITIH6Q6UXX5 1313 aa10.5□□□□□ -0.73
SMARCD1-206ENST00000549274 GBF1Q92538 1859 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 CASTOR2A6NHX0 329 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 NRP1O14786 923 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 SYN3O14994 580 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms