RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 RNF169Q8NCN4 708 aa5.43□□□□□ -1.54
APP-217ENST00000548570 RNF214Q8ND24 703 aa5.43□□□□□ -1.54
APP-217ENST00000548570 LMO3Q8TAP4 145 aa5.43□□□□□ -1.54
APP-217ENST00000548570 GOLGA5Q8TBA6 731 aa5.43□□□□□ -1.54
APP-217ENST00000548570 FAM200AQ8TCP9 573 aa5.43□□□□□ -1.54
APP-217ENST00000548570 RABGGTAQ92696 567 aa5.43□□□□□ -1.54
APP-217ENST00000548570 SEMA4DQ92854 862 aa5.43□□□□□ -1.54
APP-217ENST00000548570 HPS1Q92902 700 aa5.43□□□□□ -1.54
APP-217ENST00000548570 CCDC127Q96BQ5 260 aa5.43□□□□□ -1.54
APP-217ENST00000548570 CNOT6LQ96LI5 555 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 CEP63Q96MT8 703 aa5.43□□□□□ -1.54
APP-217ENST00000548570 NAP1L5Q96NT1 182 aaPredicted RBP5.43□□□□□ -1.54
APP-217ENST00000548570 ACAP3Q96P50 834 aa5.43□□□□□ -1.54
APP-217ENST00000548570 LBHD1Q9BQE6 289 aaPredicted RBP5.43□□□□□ -1.54
APP-217ENST00000548570 VN1R3Q9BXE9 311 aa5.43□□□□□ -1.54
APP-217ENST00000548570 TMEM117Q9H0C3 514 aa5.43□□□□□ -1.54
APP-217ENST00000548570 TSPY26PQ9H489 355 aa5.43□□□□□ -1.54
APP-217ENST00000548570 THAP9Q9H5L6 903 aa5.43□□□□□ -1.54
APP-217ENST00000548570 RSAD1Q9HA92 442 aa5.43□□□□□ -1.54
APP-217ENST00000548570 GOLGA2P5Q9HBQ8 144 aa5.43□□□□□ -1.54
APP-217ENST00000548570 TBC1D13Q9NVG8 400 aa5.43□□□□□ -1.54
APP-217ENST00000548570 MARCH5Q9NX47 278 aa5.43□□□□□ -1.54
APP-217ENST00000548570 RBAKQ9NYW8 714 aaPredicted RBP5.43□□□□□ -1.54
APP-217ENST00000548570 DNAJB4Q9UDY4 337 aa5.43□□□□□ -1.54
APP-217ENST00000548570 PARP2Q9UGN5 583 aa5.43□□□□□ -1.54
APP-217ENST00000548570 GIT1Q9Y2X7 761 aa5.43□□□□□ -1.54
APP-217ENST00000548570 MRPL42Q9Y6G3 142 aaKnown RBP5.43□□□□□ -1.54
APP-217ENST00000548570 LAMA3Q16787 3333 aa5.43□□□□□ -1.54
APP-217ENST00000548570 LTBP2Q14767 1821 aa5.43□□□□□ -1.54
APP-217ENST00000548570 TCHHQ07283 1943 aa5.42□□□□□ -1.54
APP-217ENST00000548570 KIAA0100Q14667 2235 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 ANO9A1A5B4 782 aa5.42□□□□□ -1.54
APP-217ENST00000548570 FSD2A1L4K1 749 aa5.42□□□□□ -1.54
APP-217ENST00000548570 ZNF233A6NK53 670 aa5.42□□□□□ -1.54
APP-217ENST00000548570 TBKBP1A7MCY6 615 aa5.42□□□□□ -1.54
APP-217ENST00000548570 ZBBXA8MT70 800 aa5.42□□□□□ -1.54
APP-217ENST00000548570 SOX1O00570 391 aaPredicted RBP5.42□□□□□ -1.54
APP-217ENST00000548570 LDHAP00338 332 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 AMHP03971 560 aa5.42□□□□□ -1.54
APP-217ENST00000548570 ATP2A2P16615 1042 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 RPL13P26373 211 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 LRPAP1P30533 357 aa5.42□□□□□ -1.54
APP-217ENST00000548570 GCLMP48507 274 aa5.42□□□□□ -1.54
APP-217ENST00000548570 SLC11A1P49279 550 aa5.42□□□□□ -1.54
APP-217ENST00000548570 MMP16P51512 607 aa5.42□□□□□ -1.54
APP-217ENST00000548570 CLCNKBP51801 687 aa5.42□□□□□ -1.54
APP-217ENST00000548570 VAMP7P51809 220 aa5.42□□□□□ -1.54
APP-217ENST00000548570 MLLT1Q03111 559 aaPredicted RBP5.42□□□□□ -1.54
APP-217ENST00000548570 ENPEPQ07075 957 aa5.42□□□□□ -1.54
APP-217ENST00000548570 NCBP1Q09161 790 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 KCNMA1Q12791 1236 aa5.42□□□□□ -1.54
APP-217ENST00000548570 BFSP1Q12934 665 aa5.42□□□□□ -1.54
APP-217ENST00000548570 STIM1Q13586 685 aa5.42□□□□□ -1.54
APP-217ENST00000548570 KRT31Q15323 416 aa5.42□□□□□ -1.54
APP-217ENST00000548570 ZACNQ401N2 412 aa5.42□□□□□ -1.54
APP-217ENST00000548570 TCP11X2Q5H9J9 407 aa5.42□□□□□ -1.54
APP-217ENST00000548570 NOMO2Q5JPE7 1267 aa5.42□□□□□ -1.54
APP-217ENST00000548570 TMCO4Q5TGY1 634 aa5.42□□□□□ -1.54
APP-217ENST00000548570 FAM43BQ6ZT52 329 aaPredicted RBP5.42□□□□□ -1.54
APP-217ENST00000548570 SV2AQ7L0J3 742 aa5.42□□□□□ -1.54
APP-217ENST00000548570 FRMD5Q7Z6J6 570 aa5.42□□□□□ -1.54
APP-217ENST00000548570 COLGALT2Q8IYK4 626 aa5.42□□□□□ -1.54
APP-217ENST00000548570 PHOSPHO2Q8TCD6 241 aa5.42□□□□□ -1.54
APP-217ENST00000548570 TAS1R2Q8TE23 839 aa5.42□□□□□ -1.54
APP-217ENST00000548570 RNPC3Q96LT9 517 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 CGRRF1Q99675 332 aa5.42□□□□□ -1.54
APP-217ENST00000548570 TSG101Q99816 390 aa5.42□□□□□ -1.54
APP-217ENST00000548570 ADPGKQ9BRR6 497 aa5.42□□□□□ -1.54
APP-217ENST00000548570 PBX4Q9BYU1 374 aa5.42□□□□□ -1.54
APP-217ENST00000548570 UBE2OQ9C0C9 1292 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 MTMR12Q9C0I1 747 aa5.42□□□□□ -1.54
APP-217ENST00000548570 XYLT2Q9H1B5 865 aa5.42□□□□□ -1.54
APP-217ENST00000548570 ASB7Q9H672 318 aa5.42□□□□□ -1.54
APP-217ENST00000548570 NRDE2Q9H7Z3 1164 aa5.42□□□□□ -1.54
APP-217ENST00000548570 RPF1Q9H9Y2 349 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 PLEKHA5Q9HAU0 1116 aa5.42□□□□□ -1.54
APP-217ENST00000548570 APOBEC3GQ9HC16 384 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 TAB2Q9NYJ8 693 aa5.42□□□□□ -1.54
APP-217ENST00000548570 LIMA1Q9UHB6 759 aaKnown RBP5.42□□□□□ -1.54
APP-217ENST00000548570 AJAP1Q9UKB5 411 aaPredicted RBP5.42□□□□□ -1.54
APP-217ENST00000548570 INPP5FQ9Y2H2 1132 aa5.42□□□□□ -1.54
APP-217ENST00000548570 C2CD2Q9Y426 696 aa5.42□□□□□ -1.54
APP-217ENST00000548570 NME7Q9Y5B8 376 aa5.42□□□□□ -1.54
APP-217ENST00000548570 PCDHB7Q9Y5E2 793 aa5.42□□□□□ -1.54
APP-217ENST00000548570 SLC4A7Q9Y6M7 1214 aa5.42□□□□□ -1.54
APP-217ENST00000548570 CHD7Q9P2D1 2997 aa5.41□□□□□ -1.54
APP-217ENST00000548570 LINC01553A4QN01 128 aa5.41□□□□□ -1.54
APP-217ENST00000548570 EPOPA6NHQ4 379 aa5.41□□□□□ -1.54
APP-217ENST00000548570 CASTOR2A6NHX0 329 aa5.41□□□□□ -1.54
APP-217ENST00000548570 KCNJ18B7U540 433 aa5.41□□□□□ -1.54
APP-217ENST00000548570 PIRO00625 290 aa5.41□□□□□ -1.54
APP-217ENST00000548570 EPHB6O15197 1021 aa5.41□□□□□ -1.54
APP-217ENST00000548570 PMM2O15305 246 aa5.41□□□□□ -1.54
APP-217ENST00000548570 TEX33O43247 280 aa5.41□□□□□ -1.54
APP-217ENST00000548570 EFCAB14O75071 495 aa5.41□□□□□ -1.54
APP-217ENST00000548570 KIF4AO95239 1232 aa5.41□□□□□ -1.54
APP-217ENST00000548570 IL18RAPO95256 599 aa5.41□□□□□ -1.54
APP-217ENST00000548570 GALTP07902 379 aa5.41□□□□□ -1.54
APP-217ENST00000548570 DLATP10515 647 aaKnown RBP5.41□□□□□ -1.54
APP-217ENST00000548570 EPB41P11171 864 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms