RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 CTSAP10619 480 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 ERCC5P28715 1186 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 PNPLA4P41247 253 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 VAMP7P51809 220 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 GUCY2FP51841 1108 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 MCCD1P59942 119 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 SMC1AQ14683 1233 aaKnown RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 STX1AQ16623 288 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 GPR65Q8IYL9 337 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 CSGALNACT2Q8N6G5 542 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 C1orf127Q8N9H9 656 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 OR5B17Q8NGF7 314 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 HASPINQ8TF76 798 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 ZNF560Q96MR9 790 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 TCF25Q9BQ70 676 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 GPR62Q9BZJ7 368 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 GZF1Q9H116 711 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 NSUN3Q9H649 340 aaKnown RBP12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 IRAK3Q9Y616 596 aa12.29□□□□□ -0.44
CALCOCO1-208ENST00000547988 LRRIQ3A6PVS8 624 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 GNA14O95837 355 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 ITGB3P05106 788 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 URODP06132 367 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 POLR2BP30876 1174 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 GLUD2P49448 558 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 AARSP49588 968 aaKnown RBP eCLIP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 TAF6P49848 677 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 STX17P56962 302 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 ERVFC1P60507 584 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 NFKBIBQ15653 356 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 USP41Q3LFD5 358 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 LMBRD2Q68DH5 695 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 TMC7Q7Z402 723 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 LRRC52Q8N7C0 313 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 PLEKHO2Q8TD55 490 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 PPP2R3CQ969Q6 453 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 EEF2KMTQ96G04 330 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 BORCS6Q96GS4 357 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 SUSD3Q96L08 255 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 POP1Q99575 1024 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 METTL14Q9HCE5 456 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 MRPL17Q9NRX2 175 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 CHST7Q9NS84 486 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 R3HCC1Q9Y3T6 440 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 PTPRDP23468 1912 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 EYSQ5T1H1 3165 aa12.28□□□□□ -0.44
CALCOCO1-208ENST00000547988 C2orf16Q68DN1 1984 aa12.27□□□□□ -0.44
CALCOCO1-208ENST00000547988 ARHGEF37A1IGU5 675 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 FSD2A1L4K1 749 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 M0QZQ0 153 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 SYN3O14994 580 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 STX10O60499 249 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 KRT19P08727 400 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 FGFR3P22607 806 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 IRS1P35568 1242 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 BRCC3P46736 316 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 LILRA4P59901 499 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 DLG4P78352 724 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 RBP5P82980 135 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 DSG1Q02413 1049 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 CREMQ03060 361 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 PTPN14Q15678 1187 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 SV2CQ496J9 727 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 FAM171A1Q5VUB5 890 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 KIAA0319Q5VV43 1072 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 PLPP4Q5VZY2 271 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 KIAA1841Q6NSI8 718 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 PDXDC1Q6P996 788 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 FRMD5Q7Z6J6 570 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 TMEM130Q8N3G9 435 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 MRPL43Q8N983 215 aaKnown RBP12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 CXorf38Q8TB03 319 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 MICAL1Q8TDZ2 1067 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 ZNF516Q92618 1163 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 TTPALQ9BTX7 342 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 SRRTQ9BXP5 876 aaKnown RBP12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 ARMCX3Q9UH62 379 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 SIX4Q9UIU6 781 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 AGAP1Q9UPQ3 857 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.45
CALCOCO1-208ENST00000547988 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 PPEF2O14830 753 aa12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 CSPG5O95196 566 aa12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 CXCL14O95715 111 aa12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 C4BPAP04003 597 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 CCDC192P0DO97 292 aa12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 IGFBP6P24592 240 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 GTF2H1P32780 548 aa12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 MARSP56192 900 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-208ENST00000547988 TYRO3Q06418 890 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms