RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 GFM2Q969S9 779 aaKnown RBP5.35□□□□□ -1.55
CBX5-203ENST00000547872 HIST1H2AHQ96KK5 128 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 LRRC37BQ96QE4 947 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 LMF1Q96S06 567 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 HIST1H2AJQ99878 128 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 NOL10Q9BSC4 688 aaKnown RBP5.35□□□□□ -1.55
CBX5-203ENST00000547872 PITHD1Q9GZP4 211 aaPredicted RBP5.35□□□□□ -1.55
CBX5-203ENST00000547872 SEC61A2Q9H9S3 476 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 VEZTQ9HBM0 779 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 STXBP5LQ9Y2K9 1186 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 NR2E3Q9Y5X4 410 aa5.35□□□□□ -1.55
CBX5-203ENST00000547872 SSC5DA1L4H1 1573 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 CEMIPQ8WUJ3 1361 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 HTTP42858 3142 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 MYPNQ86TC9 1320 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 A0A0A6YYJ9 748 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 ERVV-1B6SEH8 477 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 GPR39O43194 453 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 FOXD2O60548 495 aaPredicted RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 EYA4O95677 639 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 CELA3BP08861 270 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 CCL5P13501 91 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 ANTXR2P58335 489 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 FAPQ12884 760 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 ADAM15Q13444 863 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 KIF22Q14807 665 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 RNF151Q2KHN1 245 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 PROSER3Q2NL68 480 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 PARP10Q53GL7 1025 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 ZBTB41Q5SVQ8 909 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 RNF219Q5W0B1 726 aaPredicted RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 SLFN13Q68D06 897 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 OTUD7BQ6GQQ9 843 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 SPATS2Q86XZ4 545 aaKnown RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 BCL6BQ8N143 479 aaPredicted RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 CDYL2Q8N8U2 506 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 RAET1EQ8TD07 263 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 GCDHQ92947 438 aaPredicted RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 LPPQ93052 612 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 OPTNQ96CV9 577 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 FAM89AQ96GI7 184 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 WDR92Q96MX6 357 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 ANO3Q9BYT9 981 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 C12orf65Q9H3J6 166 aaKnown RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 PUF60Q9UHX1 559 aaKnown RBP5.34□□□□□ -1.55
CBX5-203ENST00000547872 DNAI1Q9UI46 699 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 USP18Q9UMW8 372 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 PCDHB6Q9Y5E3 794 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 PCDHAC2Q9Y5I4 1007 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 PPP2R3BQ9Y5P8 575 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 PSME4Q14997 1843 aa5.34□□□□□ -1.55
CBX5-203ENST00000547872 COL3A1P02461 1466 aaPredicted RBP5.33□□□□□ -1.56
CBX5-203ENST00000547872 RPTORQ8N122 1335 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 SH3TC1Q8TE82 1336 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 CCL15-CCL14A0A0B4J2E2 113 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 PRSS38A1L453 326 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 K7ESM1 405 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 WNT10BO00744 389 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 DAPK3O43293 454 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 CLEC2LP0C7M8 214 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 XPAP23025 273 aaPredicted RBP5.33□□□□□ -1.56
CBX5-203ENST00000547872 ZNF280AP59817 542 aaPredicted RBP5.33□□□□□ -1.56
CBX5-203ENST00000547872 NFYCQ13952 458 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 CCL15Q16663 113 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 MAN2A1Q16706 1144 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 CCDC62Q6P9F0 684 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 CIR1Q86X95 450 aaPredicted RBP5.33□□□□□ -1.56
CBX5-203ENST00000547872 OR14K1Q8NGZ2 314 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 FAM122AQ96E09 287 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 NEIL1Q96FI4 390 aaPredicted RBP5.33□□□□□ -1.56
CBX5-203ENST00000547872 ACAP3Q96P50 834 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 PTPN18Q99952 460 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 FAM126AQ9BYI3 521 aaPredicted RBP5.33□□□□□ -1.56
CBX5-203ENST00000547872 WNT8AQ9H1J5 351 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 TOPORSQ9NS56 1045 aaPredicted RBP5.33□□□□□ -1.56
CBX5-203ENST00000547872 MTMR10Q9NXD2 777 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 PPP4R1LQ9P1A2 415 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 JAG2Q9Y219 1238 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 COL6A3P12111 3177 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 ALPK3Q96L96 1907 aa5.33□□□□□ -1.56
CBX5-203ENST00000547872 CDC14BO60729 498 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 TFRCP02786 760 aaKnown RBP5.32□□□□□ -1.56
CBX5-203ENST00000547872 ITGB3P05106 788 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 PFKMP08237 780 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 U2AF1L5P0DN76 240 aaPredicted RBP5.32□□□□□ -1.56
CBX5-203ENST00000547872 RBM5P52756 815 aaKnown RBP eCLIP5.32□□□□□ -1.56
CBX5-203ENST00000547872 U2AF1Q01081 240 aaKnown RBP eCLIP5.32□□□□□ -1.56
CBX5-203ENST00000547872 PPARAQ07869 468 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 TBR1Q16650 682 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 LHFPL2Q6ZUX7 228 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 LIMS2Q7Z4I7 341 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 DDX42Q86XP3 938 aaKnown RBP eCLIP5.32□□□□□ -1.56
CBX5-203ENST00000547872 APOBEC3FQ8IUX4 373 aaKnown RBP5.32□□□□□ -1.56
CBX5-203ENST00000547872 FAM43AQ8N2R8 423 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 GIMAP8Q8ND71 665 aaPredicted RBP5.32□□□□□ -1.56
CBX5-203ENST00000547872 AGBL3Q8NEM8 1001 aa5.32□□□□□ -1.56
CBX5-203ENST00000547872 DIS3LQ8TF46 1054 aaKnown RBP5.32□□□□□ -1.56
CBX5-203ENST00000547872 SLC7A6OSQ96CW6 309 aaPredicted RBP5.32□□□□□ -1.56
CBX5-203ENST00000547872 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms