RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TCEAL8Q8IYN2 117 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 ING5Q8WYH8 240 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 KIF12Q96FN5 646 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 CLIC6Q96NY7 704 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 IKZF4Q9H2S9 585 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 ZHX3Q9H4I2 956 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 CYP4F11Q9HBI6 524 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 SLC2A4RGQ9NR83 387 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 FBXO2Q9UK22 296 aaPredicted RBP14.54□□□□□ -0.08
CPSF6-204ENST00000547486 KCNH3Q9ULD8 1083 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 PCDHB8Q9UN66 801 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 TIMM13Q9Y5L4 95 aaPredicted RBP14.54□□□□□ -0.08
CPSF6-204ENST00000547486 DOCK8Q8NF50 2099 aa14.54□□□□□ -0.08
CPSF6-204ENST00000547486 TISP43B9A030 160 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 M0QZQ0 153 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 NRG2O14511 850 aaPredicted RBP14.53□□□□□ -0.08
CPSF6-204ENST00000547486 PRRG1O14668 218 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 PPEF2O14830 753 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 HNRNPDLO14979 420 aaKnown RBP14.53□□□□□ -0.08
CPSF6-204ENST00000547486 OGTO15294 1046 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 ADRB2P07550 413 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 PTPN2P17706 415 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 ELF1P32519 619 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 GTF2BQ00403 316 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 CCDC105Q8IYK2 499 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 DTWD2Q8NBA8 298 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 RASSF8Q8NHQ8 419 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 LARP4BQ92615 738 aaKnown RBP14.53□□□□□ -0.08
CPSF6-204ENST00000547486 MCRS1Q96EZ8 462 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 RTP3Q9BQQ7 232 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 TBC1D17Q9HA65 648 aa14.53□□□□□ -0.08
CPSF6-204ENST00000547486 PROB1E7EW31 1015 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 GFRA3O60609 400 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 CYP3A5P20815 502 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 PDCP20941 246 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 CEBPZQ03701 1054 aaKnown RBP14.52□□□□□ -0.09
CPSF6-204ENST00000547486 RNF19BQ6ZMZ0 732 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 DYMQ7RTS9 669 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 APPL2Q8NEU8 664 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 TCEAL4Q96EI5 215 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 KXD1Q9BQD3 176 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 MSTO1Q9BUK6 570 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 PLA2G2FQ9BZM2 168 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 AVENQ9NQS1 362 aaPredicted RBP14.52□□□□□ -0.09
CPSF6-204ENST00000547486 ARHGEF3Q9NR81 526 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 CPSF3Q9UKF6 684 aaKnown RBP14.52□□□□□ -0.09
CPSF6-204ENST00000547486 UBQLN1Q9UMX0 589 aaKnown RBP14.52□□□□□ -0.09
CPSF6-204ENST00000547486 MRPS23Q9Y3D9 190 aaKnown RBP14.52□□□□□ -0.09
CPSF6-204ENST00000547486 SRPRBQ9Y5M8 271 aaKnown RBP14.52□□□□□ -0.09
CPSF6-204ENST00000547486 MYO15AQ9UKN7 3530 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 CACNA1HO95180 2353 aa14.52□□□□□ -0.09
CPSF6-204ENST00000547486 NOTCH4Q99466 2003 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 SPTLC1O15269 473 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 TBCAO75347 108 aaKnown RBP14.51□□□□□ -0.09
CPSF6-204ENST00000547486 OAZ2O95190 189 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 VNN2O95498 520 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 LRG1P02750 347 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 DCNP07585 359 aaKnown RBP14.51□□□□□ -0.09
CPSF6-204ENST00000547486 OR4Q2P0C623 313 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 CEBPBP17676 345 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 SCP2P22307 547 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 NBL1P41271 181 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 CCR2P41597 374 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 AARSP49588 968 aaKnown RBP eCLIP14.51□□□□□ -0.09
CPSF6-204ENST00000547486 PPP2R3AQ06190 1150 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 ADCY1Q08828 1119 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 SNW1Q13573 536 aaKnown RBP14.51□□□□□ -0.09
CPSF6-204ENST00000547486 ANGPT1Q15389 498 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 KYAT1Q16773 422 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 PRSS36Q5K4E3 855 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 SPATA1Q5VX52 437 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 TPGS2Q68CL5 300 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 JADE1Q6IE81 842 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 ZNF280DQ6N043 979 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 PHLDB3Q6NSJ2 640 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 MTSS1LQ765P7 747 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 ASCL5Q7RTU5 278 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 ZNF720Q7Z2F6 126 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 MAP4K3Q8IVH8 894 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 HS6ST3Q8IZP7 471 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 CORO1BQ9BR76 489 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 BACH2Q9BYV9 841 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 RPF1Q9H9Y2 349 aaKnown RBP14.51□□□□□ -0.09
CPSF6-204ENST00000547486 DLGAP2Q9P1A6 1054 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 CEP72Q9P209 647 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 MTMR6Q9Y217 621 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 INSL5Q9Y5Q6 135 aa14.51□□□□□ -0.09
CPSF6-204ENST00000547486 VPS13AQ96RL7 3174 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 MYMKA6NI61 221 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 LRRN2O75325 713 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 NFICP08651 508 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 GLULP15104 373 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 ACOT2P49753 483 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 STARD6P59095 220 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 LILRA4P59901 499 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 YWHAHQ04917 246 aaPredicted RBP14.5□□□□□ -0.09
CPSF6-204ENST00000547486 KCNA1Q09470 495 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 TWF1Q12792 350 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms