RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 EPCAMP16422 314 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.51
GCN1-202ENST00000547263 NDUFV1P49821 464 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 SPAG1Q07617 926 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 RAB33AQ14088 237 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 ZCWPW2Q504Y3 356 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 C9orf57Q5W0N0 161 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
GCN1-202ENST00000547263 SLC8B1Q6J4K2 584 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 ARMCX5Q6P1M9 558 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 GUF1Q8N442 669 aaKnown RBP11.86□□□□□ -0.51
GCN1-202ENST00000547263 ADAMTS19Q8TE59 1207 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 SAAL1Q96ER3 474 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 B3GALT6Q96L58 329 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 FAM213AQ9BRX8 229 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 EXOC1Q9NV70 894 aa11.86□□□□□ -0.51
GCN1-202ENST00000547263 PDXKO00764 312 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 PPEF2O14830 753 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 SPTLC1O15269 473 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 ADAM12O43184 909 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 OAZ2O95190 189 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 CYP11A1P05108 521 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 POU2F2P09086 479 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 SRGAP2BP0DMP2 458 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 TKTP29401 623 aaKnown RBP11.85□□□□□ -0.51
GCN1-202ENST00000547263 GUCY2FP51841 1108 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 LILRA4P59901 499 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 CLDN10P78369 228 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 ITIH3Q06033 890 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 CBX2Q14781 532 aaPredicted RBP11.85□□□□□ -0.51
GCN1-202ENST00000547263 TMEM132DQ14C87 1099 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 PRSS55Q6UWB4 352 aaPredicted RBP11.85□□□□□ -0.51
GCN1-202ENST00000547263 RSPO2Q6UXX9 243 aaPredicted RBP11.85□□□□□ -0.51
GCN1-202ENST00000547263 CYP26C1Q6V0L0 522 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 C15orf39Q6ZRI6 1047 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 ANKS3Q6ZW76 656 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 RTL10Q7L3V2 364 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 CBWD2Q8IUF1 395 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 GOLGA5Q8TBA6 731 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 RIN2Q8WYP3 895 aaPredicted RBP11.85□□□□□ -0.51
GCN1-202ENST00000547263 MFSD14AQ96MC6 490 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 GSDMAQ96QA5 445 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 ADAM7Q9H2U9 754 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
GCN1-202ENST00000547263 FBXW11Q9UKB1 542 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 USP15Q9Y4E8 981 aaPredicted RBP11.85□□□□□ -0.51
GCN1-202ENST00000547263 PTPRJQ12913 1337 aa11.85□□□□□ -0.51
GCN1-202ENST00000547263 NCOR1O75376 2440 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 ZNF233A6NK53 670 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 I3L4J1 428 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 MAPK13O15264 365 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 TGM5O43548 720 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
GCN1-202ENST00000547263 ABLIM3O94929 683 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 TYMPP19971 482 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 KLRC2P26717 231 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 HOXA9P31269 272 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 ZP2Q05996 745 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 ENPEPQ07075 957 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 PSMD6Q15008 389 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 SURF1Q15526 300 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 PSMD5Q16401 504 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 TPRNQ4KMQ1 711 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
GCN1-202ENST00000547263 KIAA1841Q6NSI8 718 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 HS2ST1Q7LGA3 356 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 LIMS2Q7Z4I7 341 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 NELFCDQ8IXH7 590 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 C1orf127Q8N9H9 656 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 XXYLT1Q8NBI6 393 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 FEZF2Q8TBJ5 459 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 PLEKHA4Q9H4M7 779 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 PCIF1Q9H4Z3 704 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 SFXN1Q9H9B4 322 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 INTS13Q9NVM9 706 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 SIX4Q9UIU6 781 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 FAM50BQ9Y247 325 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 TTC28Q96AY4 2481 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 NOTCH4Q99466 2003 aa11.84□□□□□ -0.51
GCN1-202ENST00000547263 VCANP13611 3396 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 C2CD2LO14523 706 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 GLUD1P00367 558 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 UBE2HP62256 183 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 CYP24A1Q07973 514 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 PNOCQ13519 176 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 SNRNP35Q16560 246 aaKnown RBP11.83□□□□□ -0.52
GCN1-202ENST00000547263 SCARA3Q6AZY7 606 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 GPR149Q86SP6 731 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 WDR49Q8IV35 697 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 ADHFE1Q8IWW8 467 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 ZC3H3Q8IXZ2 948 aaKnown RBP11.83□□□□□ -0.52
GCN1-202ENST00000547263 LRRC52Q8N7C0 313 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 PLEKHO2Q8TD55 490 aa11.83□□□□□ -0.52
GCN1-202ENST00000547263 ZNF707Q96C28 371 aaPredicted RBP11.83□□□□□ -0.52
GCN1-202ENST00000547263 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms