RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 STX17P56962 302 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 SOX4Q06945 474 aaPredicted RBP19.32■□□□□ 0.68
BRF1-209ENST00000547052 CETN1Q12798 172 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 BFSP1Q12934 665 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 NAB2Q15742 525 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 ZBTB6Q15916 424 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 PLPP4Q5VZY2 271 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 C9orf57Q5W0N0 161 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.32■□□□□ 0.68
BRF1-209ENST00000547052 SPRED2Q7Z698 418 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 EFCAB13Q8IY85 973 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 ZSWIM2Q8NEG5 633 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 MYLIPQ8WY64 445 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.32■□□□□ 0.68
BRF1-209ENST00000547052 TMEM63CQ9P1W3 806 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 MYH10P35580 1976 aa19.32■□□□□ 0.68
BRF1-209ENST00000547052 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.31■□□□□ 0.68
BRF1-209ENST00000547052 EPOPA6NHQ4 379 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 RFXAPO00287 272 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 NCK2O43639 380 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 AKAP3O75969 853 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 ITGB3P05106 788 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 TPM2P07951 284 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 ODC1P11926 461 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 BMP6P22004 513 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 CASP4P49662 377 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 DPCR1Q3MIW9 517 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 DCAF17Q5H9S7 520 aaPredicted RBP19.31■□□□□ 0.68
BRF1-209ENST00000547052 FAM171A1Q5VUB5 890 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 FRMD5Q7Z6J6 570 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 FILIP1Q7Z7B0 1213 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 METTL23Q86XA0 190 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 CEP57Q86XR8 500 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 CREBRFQ8IUR6 639 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 PARD3BQ8TEW8 1205 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 TTPALQ9BTX7 342 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 CXCL16Q9H2A7 254 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 MARCH5Q9NX47 278 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 DSEQ9UL01 958 aa19.31■□□□□ 0.68
BRF1-209ENST00000547052 H7C4K7 107 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 SYN3O14994 580 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 B4GALT3O60512 393 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 N4BP1O75113 896 aaKnown RBP19.3■□□□□ 0.68
BRF1-209ENST00000547052 CTSAP10619 480 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 P4HA1P13674 534 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 POU3F3P20264 500 aaPredicted RBP19.3■□□□□ 0.68
BRF1-209ENST00000547052 POLR2BP30876 1174 aaKnown RBP19.3■□□□□ 0.68
BRF1-209ENST00000547052 GTF2H1P32780 548 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 TTI2Q6NXR4 508 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 TMEM173Q86WV6 379 aaPredicted RBP19.3■□□□□ 0.68
BRF1-209ENST00000547052 GPR65Q8IYL9 337 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 LRRC52Q8N7C0 313 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 ANKRD20A12PQ8NF67 263 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 RABGGTAQ92696 567 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 GUCD1Q96NT3 240 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 CDCA3Q99618 268 aaPredicted RBP19.3■□□□□ 0.68
BRF1-209ENST00000547052 PAAF1Q9BRP4 392 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 SRRTQ9BXP5 876 aaKnown RBP19.3■□□□□ 0.68
BRF1-209ENST00000547052 ZBP1Q9H171 429 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 CACNG4Q9UBN1 327 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 AGAP1Q9UPQ3 857 aa19.3■□□□□ 0.68
BRF1-209ENST00000547052 MEFVO15553 781 aaPredicted RBP19.29■□□□□ 0.68
BRF1-209ENST00000547052 CXCL14O95715 111 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 ADH1AP07327 375 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 TRIM21P19474 475 aaKnown RBP19.29■□□□□ 0.68
BRF1-209ENST00000547052 PMS1P54277 932 aaKnown RBP19.29■□□□□ 0.68
BRF1-209ENST00000547052 SKIV2LQ15477 1246 aaKnown RBP19.29■□□□□ 0.68
BRF1-209ENST00000547052 NFKBIBQ15653 356 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 LMBRD2Q68DH5 695 aaPredicted RBP19.29■□□□□ 0.68
BRF1-209ENST00000547052 ANKS3Q6ZW76 656 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 PPFIBP1Q86W92 1011 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 OXCT2Q9BYC2 517 aaPredicted RBP19.29■□□□□ 0.68
BRF1-209ENST00000547052 DNAI2Q9GZS0 605 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 TLE6Q9H808 572 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 DPP7Q9UHL4 492 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 TSC2P49815 1807 aa19.29■□□□□ 0.68
BRF1-209ENST00000547052 SPDYE4A6NLX3 237 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 LRRIQ3A6PVS8 624 aaPredicted RBP19.28■□□□□ 0.68
BRF1-209ENST00000547052 PIRO00625 290 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 C2CD2LO14523 706 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 ATICP31939 592 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 PIK3CAP42336 1068 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 GUCY2FP51841 1108 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 TNNC1P63316 161 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 TYRO3Q06418 890 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 TRAPPC11Q7Z392 1133 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 ZC3H3Q8IXZ2 948 aaKnown RBP19.28■□□□□ 0.68
BRF1-209ENST00000547052 C1orf127Q8N9H9 656 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 RIN2Q8WYP3 895 aaPredicted RBP19.28■□□□□ 0.68
BRF1-209ENST00000547052 SUSD3Q96L08 255 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 MMRN2Q9H8L6 949 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 PCDHB8Q9UN66 801 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 MTCH2Q9Y6C9 303 aa19.28■□□□□ 0.68
BRF1-209ENST00000547052 ANO9A1A5B4 782 aa19.27■□□□□ 0.68
BRF1-209ENST00000547052 HUS1O60921 280 aa19.27■□□□□ 0.68
BRF1-209ENST00000547052 CAVIN2O95810 425 aa19.27■□□□□ 0.68
BRF1-209ENST00000547052 MXI1P50539 228 aa19.27■□□□□ 0.68
BRF1-209ENST00000547052 LILRA4P59901 499 aa19.27■□□□□ 0.68
BRF1-209ENST00000547052 TPM4P67936 248 aa19.27■□□□□ 0.68
BRF1-209ENST00000547052 DSG1Q02413 1049 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms