RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RPL7AP62424 266 aaKnown RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 PRKCZQ05513 592 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 NFX1Q12986 1120 aaKnown RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 DUOXA2Q1HG44 320 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 ZNF699Q32M78 642 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 SLC10A6Q3KNW5 377 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 C17orf99Q6UX52 265 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 CATSPER4Q7RTX7 472 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 HVCN1Q96D96 273 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 TWNKQ96RR1 684 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 CGRRF1Q99675 332 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 ERVK-5Q9HDB9 667 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 CISHQ9NSE2 258 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 PRUNE2Q8WUY3 3088 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 ANKRD62A6NC57 917 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 TRPA1O75762 1119 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 ACO1P21399 889 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 POLR2BP30876 1174 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 FKBP1BP68106 108 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 CDR2Q01850 454 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 TFDP1Q14186 410 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 MORN1Q5T089 497 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 ZFYVE27Q5T4F4 411 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 ZNF662Q6ZS27 426 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 USP37Q86T82 979 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 BRSK2Q8IWQ3 736 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 RFFLQ8WZ73 363 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 TRIB2Q92519 343 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 WNT8BQ93098 351 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 ZMAT2Q96NC0 199 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 MAP7D2Q96T17 732 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 HEMGNQ9BXL5 484 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 SIX4Q9UIU6 781 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 GJD2Q9UKL4 321 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 NENFQ9UMX5 172 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 FAM155AB1AL88 458 aaPredicted RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 TSPAN1O60635 241 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 CLTAP09496 248 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 FAM153BP0C7A2 387 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 PHKA2P46019 1235 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 CARSP49589 748 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 RABGGTBP53611 331 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 GPC5P78333 572 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 MCL1Q07820 350 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 FAM153CQ494X1 144 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 RNF169Q8NCN4 708 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 ZNF564Q8TBZ8 553 aaPredicted RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 SDCBP2Q9H190 292 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 EPB41L5Q9HCM4 733 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 ARGLU1Q9NWB6 273 aaPredicted RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 FAM153AQ9UHL3 310 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 ANAPC7Q9UJX3 599 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 AGAP1Q9UPQ3 857 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 GNEQ9Y223 722 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 PIN4Q9Y237 131 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 PTPN22Q9Y2R2 807 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 NOC2LQ9Y3T9 749 aaKnown RBP12.79□□□□□ -0.36
CCDC38-202ENST00000546386 LRRC37A2A6NM11 1700 aa12.79□□□□□ -0.36
CCDC38-202ENST00000546386 H0YCG3 227 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 GOLGA8SH3BPF8 625 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 SPOPO43791 374 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 TCP1P17987 556 aaKnown RBP12.78□□□□□ -0.36
CCDC38-202ENST00000546386 SCP2P22307 547 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 ZPBP2Q6X784 338 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 ZNF606Q8WXB4 792 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 IMPG2Q9BZV3 1241 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 SLC5A4Q9NY91 659 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 AMFRQ9UKV5 643 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 SLC15A5A6NIM6 579 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 KRIT1O00522 736 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 P4HA2O15460 535 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 GRAP2O75791 330 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 LDHAP00338 332 aaKnown RBP12.78□□□□□ -0.36
CCDC38-202ENST00000546386 TMEM253P0C7T8 217 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 CCDC172P0C7W6 258 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 HOXA11P31270 313 aaPredicted RBP12.78□□□□□ -0.36
CCDC38-202ENST00000546386 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 KCNJ1P48048 391 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 SNX1Q13596 522 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 MFSD10Q14728 455 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 BEND6Q5SZJ8 279 aaPredicted RBP12.78□□□□□ -0.36
CCDC38-202ENST00000546386 C8orf74Q6P047 294 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 FUT8Q9BYC5 575 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 DPH5Q9H2P9 285 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 TUBGCP4Q9UGJ1 667 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 CHD7Q9P2D1 2997 aa12.78□□□□□ -0.36
CCDC38-202ENST00000546386 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.36
CCDC38-202ENST00000546386 RAD51CO43502 376 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms