RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 KREMEN1Q96MU8 473 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 GMLQ99445 158 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 FAM187AA6NFU0 413 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 ENTPD3O75355 529 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 POLR2MP0CAP2 368 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 CYP11B1P15538 503 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 ADRA1DP25100 572 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 POU5F1Q01860 360 aaKnown RBP15.54■□□□□ 0.08
HOXC11-202ENST00000546378 PLCB4Q15147 1175 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 ARHGEF18Q6ZSZ5 1173 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 ARMC9Q7Z3E5 817 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 FAM151AQ8WW52 585 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 GPR88Q9GZN0 384 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 SPATS2LQ9NUQ6 558 aaKnown RBP15.54■□□□□ 0.08
HOXC11-202ENST00000546378 ZFP69BQ9UJL9 534 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 DENND3A2RUS2 1198 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 DPPA5A6NC42 116 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 STK10O94804 968 aaKnown RBP15.54■□□□□ 0.08
HOXC11-202ENST00000546378 F7P08709 466 aaPredicted RBP15.54■□□□□ 0.08
HOXC11-202ENST00000546378 CD19P15391 556 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 CETN2P41208 172 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 SPIRE1Q08AE8 756 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 PCNX4Q63HM2 1172 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 PDCD7Q8N8D1 485 aaKnown RBP15.54■□□□□ 0.08
HOXC11-202ENST00000546378 XXYLT1Q8NBI6 393 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 NAF1Q96HR8 494 aaKnown RBP15.54■□□□□ 0.08
HOXC11-202ENST00000546378 ACSS2Q9NR19 701 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 PCDHB4Q9Y5E5 795 aa15.54■□□□□ 0.08
HOXC11-202ENST00000546378 GBP1P32455 592 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 PRKCIP41743 596 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 SCARA3Q6AZY7 606 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 ZBTB33Q86T24 672 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 TTC7BQ86TV6 843 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 LRRC6Q86X45 466 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 CFAP61Q8NHU2 1237 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 SNF8Q96H20 258 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 CLPTM1LQ96KA5 538 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 ZNF395Q9H8N7 513 aaPredicted RBP15.53■□□□□ 0.08
HOXC11-202ENST00000546378 CPSF2Q9P2I0 782 aaKnown RBP15.53■□□□□ 0.08
HOXC11-202ENST00000546378 TTC4O95801 387 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 KRT1P04264 644 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 PTGER2P43116 358 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 MAGEA4P43358 317 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 ALCAMQ13740 583 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 RCN1Q15293 331 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 SNRNP35Q16560 246 aaKnown RBP15.53■□□□□ 0.08
HOXC11-202ENST00000546378 PIGWQ7Z7B1 504 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 AGBL3Q8NEM8 1001 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 ARMC2Q8NEN0 867 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 LENG9Q96B70 501 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 RILPQ96NA2 401 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 NT5C1BQ96P26 610 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 KRT36O76013 467 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 GNAT1P11488 350 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 PRELPP51888 382 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 TAS2R40P59535 323 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 FKBP1AP62942 108 aaKnown RBP15.53■□□□□ 0.08
HOXC11-202ENST00000546378 PPP2R5DQ14738 602 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 CRYMQ14894 314 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 SLC1A5Q15758 541 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 SPDYE2Q495Y8 402 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 WLSQ5T9L3 541 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 EEPD1Q7L9B9 569 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 OTOP1Q7RTM1 612 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 SLFN11Q7Z7L1 901 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 STMN2Q93045 179 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 PGM2Q96G03 612 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 MRIQ9BWK5 157 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 TBC1D10AQ9BXI6 508 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 PARP2Q9UGN5 583 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 DNPEPQ9ULA0 475 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 TELO2Q9Y4R8 837 aa15.53■□□□□ 0.08
HOXC11-202ENST00000546378 RTN2O75298 545 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 ALDH3A1P30838 453 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 STAT2P52630 851 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 WDR4P57081 412 aaKnown RBP15.52■□□□□ 0.08
HOXC11-202ENST00000546378 YWHAGP61981 247 aaKnown RBP eCLIP15.52■□□□□ 0.08
HOXC11-202ENST00000546378 CDO1Q16878 200 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 C1orf186Q6ZWK4 172 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 TTC16Q8NEE8 873 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 NACC1Q96RE7 527 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 CYP4F11Q9HBI6 524 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
HOXC11-202ENST00000546378 AAASQ9NRG9 546 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 SLC12A4Q9UP95 1085 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 NEU2Q9Y3R4 380 aa15.52■□□□□ 0.08
HOXC11-202ENST00000546378 CYP3A7-CYP3A51PA0A087WV96 503 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 NFIBO00712 420 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 ASAP2O43150 1006 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 RPL7AP62424 266 aaKnown RBP15.52■□□□□ 0.07
HOXC11-202ENST00000546378 STRN3Q13033 797 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 CFAP157Q5JU67 520 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 RHPN2Q8IUC4 686 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 SIAH1Q8IUQ4 282 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 USP6NLQ92738 828 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 RUNDC3BQ96NL0 473 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 TSC22D3Q99576 134 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 PLVAPQ9BX97 442 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 SYNCQ9H7C4 482 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms