RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MBD3O95983 291 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 SRGAP2CP0DJJ0 459 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 GAP43P17677 238 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 EIF4BP23588 611 aaKnown RBP6.96□□□□□ -1.3
PRKDC-211ENST00000546304 CD52P31358 61 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 MCM4P33991 863 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 PEX3P56589 373 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 PTENP60484 403 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 MBTD1Q05BQ5 628 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 POU5F1BQ06416 359 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 COASYQ13057 564 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 CUL4BQ13620 913 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 GPNMBQ14956 572 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 POSTNQ15063 836 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 PSRC1Q6PGN9 363 aaPredicted RBP6.96□□□□□ -1.3
PRKDC-211ENST00000546304 UNC13DQ70J99 1090 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 SRGAP1Q7Z6B7 1085 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 DEFB128Q7Z7B8 93 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 FAM228AQ86W67 206 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 CCDC65Q8IXS2 484 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 GJD3Q8N144 294 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 C1orf127Q8N9H9 656 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 USP38Q8NB14 1042 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 SEPT8Q92599 483 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 APBB2Q92870 758 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 PAGE5Q96GU1 130 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 TIGD1Q96MW7 591 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 C7orf25Q9BPX7 421 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 OSBPL7Q9BZF2 842 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 INO80BQ9C086 356 aaPredicted RBP6.96□□□□□ -1.3
PRKDC-211ENST00000546304 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 C2orf40Q9H1Z8 148 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 BLZF1Q9H2G9 400 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 RASSF4Q9H2L5 321 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 CHRDQ9H2X0 955 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 MINDY3Q9H8M7 445 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 AGO3Q9H9G7 860 aaKnown RBP6.96□□□□□ -1.3
PRKDC-211ENST00000546304 IFT122Q9HBG6 1241 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 POLD4Q9HCU8 107 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 ERVK-5Q9HDB9 667 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 IL23AQ9NPF7 189 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 KMT5AQ9NQR1 393 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 OLFML3Q9NRN5 406 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 TPSG1Q9NRR2 321 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 SEL1LQ9UBV2 794 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 HOOK1Q9UJC3 728 aaKnown RBP6.96□□□□□ -1.3
PRKDC-211ENST00000546304 SQORQ9Y6N5 450 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 TRIP11Q15643 1979 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 KIAA1671Q9BY89 1806 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 CNTNAP2Q9UHC6 1331 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 ANK1P16157 1881 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 FNDC1Q4ZHG4 1894 aaPredicted RBP6.96□□□□□ -1.3
PRKDC-211ENST00000546304 DENND3A2RUS2 1198 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 A6NHS1 94 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 H0YCG3 227 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 RBAK-RBAKDNI3L0D1 243 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 SLC16A4O15374 487 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 TSPAN1O60635 241 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 CSDE1O75534 798 aaKnown RBP6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PRKCBP05771 671 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 SCP2P22307 547 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 FGFR4P22455 802 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 CES1P23141 567 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 EFNA5P52803 228 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 EPHB4P54760 987 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 NCKAP1LP55160 1127 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PNOCQ13519 176 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 SETDB1Q15047 1291 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PCBP1Q15365 356 aaKnown RBP eCLIP6.95□□□□□ -1.3
PRKDC-211ENST00000546304 MAPK6Q16659 721 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PLEKHG4Q58EX7 1191 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 FAM26FQ5R3K3 315 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 CNKSR3Q6P9H4 555 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 CATSPER4Q7RTX7 472 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 MYCT1Q8N699 235 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 SLC17A8Q8NDX2 589 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 TMEM161BQ8NDZ6 487 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 GPT2Q8TD30 523 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 LINC01599Q8WXQ3 324 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 VWCEQ96DN2 955 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 FIZ1Q96SL8 496 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 MRPL44Q9H9J2 332 aaKnown RBP6.95□□□□□ -1.3
PRKDC-211ENST00000546304 AGPAT5Q9NUQ2 364 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 EXOC1Q9NV70 894 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PANK4Q9NVE7 773 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PRMT7Q9NVM4 692 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PADI3Q9ULW8 664 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 PIN4Q9Y237 131 aaKnown RBP6.95□□□□□ -1.3
PRKDC-211ENST00000546304 NOC2LQ9Y3T9 749 aaKnown RBP6.95□□□□□ -1.3
PRKDC-211ENST00000546304 COL4A6Q14031 1691 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 TDRD15B5MCY1 1934 aaKnown RBP6.95□□□□□ -1.3
PRKDC-211ENST00000546304 SZT2Q5T011 3432 aa6.95□□□□□ -1.3
PRKDC-211ENST00000546304 NLRC5Q86WI3 1866 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 PVALEFA0A1B0GWK0 134 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 HNRNPDLO14979 420 aaKnown RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 GPR182O15218 404 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 B4GALT5O43286 388 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 KLRC4O43908 158 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms