RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 BRD9Q9H8M2 597 aa18.27■□□□□ 0.52
CPSF7-225ENST00000545934 TRPV4Q9HBA0 871 aa18.27■□□□□ 0.52
CPSF7-225ENST00000545934 ZNF334Q9HCZ1 680 aaPredicted RBP18.27■□□□□ 0.52
CPSF7-225ENST00000545934 MAFFQ9ULX9 164 aa18.27■□□□□ 0.52
CPSF7-225ENST00000545934 KIAA1024Q9UPX6 916 aa18.27■□□□□ 0.52
CPSF7-225ENST00000545934 NCANO14594 1321 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 ARNTLO00327 626 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 MCF2P10911 925 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 PSMC3P17980 439 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 CCT6AP40227 531 aaKnown RBP18.26■□□□□ 0.51
CPSF7-225ENST00000545934 PEX3P56589 373 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 OSTNP61366 133 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 SAFBQ15424 915 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF7-225ENST00000545934 SMARCD2Q92925 531 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 IRF7Q92985 503 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 MRPL4Q9BYD3 311 aaKnown RBP18.26■□□□□ 0.51
CPSF7-225ENST00000545934 CEP72Q9P209 647 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 AFF4Q9UHB7 1163 aaKnown RBP18.26■□□□□ 0.51
CPSF7-225ENST00000545934 OBSL1O75147 1896 aa18.26■□□□□ 0.51
CPSF7-225ENST00000545934 EML5Q05BV3 1969 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 MLLT6P55198 1093 aaPredicted RBP18.25■□□□□ 0.51
CPSF7-225ENST00000545934 ARPP19P56211 112 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 MAPK7Q13164 816 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 PDIA5Q14554 519 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 TTC38Q5R3I4 469 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 HS6ST3Q8IZP7 471 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 IGSF22Q8N9C0 903 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 BEST2Q8NFU1 509 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 DEPDC1BQ8WUY9 529 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 C18orf25Q96B23 403 aaPredicted RBP18.25■□□□□ 0.51
CPSF7-225ENST00000545934 CNTNAP3BQ96NU0 1288 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 ACAP3Q96P50 834 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 TARS2Q9BW92 718 aaKnown RBP18.25■□□□□ 0.51
CPSF7-225ENST00000545934 CNTNAP3Q9BZ76 1288 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 DDX19AQ9NUU7 478 aaKnown RBP18.25■□□□□ 0.51
CPSF7-225ENST00000545934 LRWD1Q9UFC0 647 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 NDRG2Q9UN36 371 aaKnown RBP18.25■□□□□ 0.51
CPSF7-225ENST00000545934 TCHHQ07283 1943 aa18.25■□□□□ 0.51
CPSF7-225ENST00000545934 CCDC169A6NNP5 214 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 CHRNB1P11230 501 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 GDI1P31150 447 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 TRAPPC10P48553 1259 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 NRLP54845 237 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 CTXN3Q4LDR2 81 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 CYP4A22Q5TCH4 519 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 MPZL3Q6UWV2 235 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 MFSD6LQ8IWD5 586 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 LEMD2Q8NC56 503 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 FAM3CQ92520 227 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 DDX12PQ92771 950 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 NTPCRQ9BSD7 190 aaKnown RBP18.24■□□□□ 0.51
CPSF7-225ENST00000545934 RTKNQ9BST9 563 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 LRRC3Q9BY71 257 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 LMAN1LQ9HAT1 526 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 NUB1Q9Y5A7 615 aa18.24■□□□□ 0.51
CPSF7-225ENST00000545934 E9PMD0 336 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 HIP1RO75146 1068 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 VNN2O95498 520 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 VIPR2P41587 438 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 CCR3P51677 355 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 NEK4P51957 841 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 TWF1Q12792 350 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 GAS6Q14393 721 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 SLC10A6Q3KNW5 377 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 IQCEQ6IPM2 695 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 RNF19BQ6ZMZ0 732 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 CELF5Q8N6W0 485 aaKnown RBP18.23■□□□□ 0.51
CPSF7-225ENST00000545934 FBXO18Q8NFZ0 1043 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 ZSCAN18Q8TBC5 510 aaPredicted RBP18.23■□□□□ 0.51
CPSF7-225ENST00000545934 C8orf76Q96K31 380 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 ZNF512Q96ME7 567 aaPredicted RBP18.23■□□□□ 0.51
CPSF7-225ENST00000545934 TBC1D32Q96NH3 1257 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 KMT5AQ9NQR1 393 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 GMEB2Q9UKD1 530 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 CDV3Q9UKY7 258 aaKnown RBP18.23■□□□□ 0.51
CPSF7-225ENST00000545934 PCDHB8Q9UN66 801 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
CPSF7-225ENST00000545934 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 PIAS3Q9Y6X2 628 aa18.23■□□□□ 0.51
CPSF7-225ENST00000545934 ZNF638Q14966 1978 aaKnown RBP18.22■□□□□ 0.51
CPSF7-225ENST00000545934 M0QZQ0 153 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 DMP1Q13316 513 aaPredicted RBP18.22■□□□□ 0.51
CPSF7-225ENST00000545934 NBR1Q14596 966 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 LAIR1Q6GTX8 287 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 C1orf186Q6ZWK4 172 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 ELMOD1Q8N336 334 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 APPL2Q8NEU8 664 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 SHKBP1Q8TBC3 707 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 RSPRY1Q96DX4 576 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 ZBTB45Q96K62 511 aaPredicted RBP18.22■□□□□ 0.51
CPSF7-225ENST00000545934 RUSC1Q9BVN2 902 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 GPR88Q9GZN0 384 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 C17orf75Q9HAS0 396 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 ASAH2Q9NR71 780 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 SPAG17Q6Q759 2223 aa18.22■□□□□ 0.51
CPSF7-225ENST00000545934 KIAA1549LQ6ZVL6 1849 aa18.21■□□□□ 0.51
CPSF7-225ENST00000545934 CACNA1BQ00975 2339 aa18.21■□□□□ 0.51
CPSF7-225ENST00000545934 LRP3O75074 770 aa18.21■□□□□ 0.51
CPSF7-225ENST00000545934 OAZ2O95190 189 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms