RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 GLRA4Q5JXX5 417 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 ELMSAN1Q6PJG2 1045 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 CEP57Q86XR8 500 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 ZBTB8OSQ8IWT0 167 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 CEP120Q8N960 986 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 MCPH1Q8NEM0 835 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 PJA1Q8NG27 643 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 PPP1R10Q96QC0 940 aaKnown RBP10.6□□□□□ -0.71
GABRB3-205ENST00000545868 CDH7Q9ULB5 785 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 GDAQ9Y2T3 454 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 GREB1Q4ZG55 1949 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 SDK1Q7Z5N4 2213 aa10.6□□□□□ -0.71
GABRB3-205ENST00000545868 TPRP12270 2363 aaKnown RBP10.59□□□□□ -0.71
GABRB3-205ENST00000545868 ACKR2O00590 384 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 MEFVO15553 781 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-205ENST00000545868 HNRNPA1P09651 372 aaKnown RBP eCLIP10.59□□□□□ -0.71
GABRB3-205ENST00000545868 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 LIG1P18858 919 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 CYP11B2P19099 503 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 FGFR3P22607 806 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 TKTP29401 623 aaKnown RBP10.59□□□□□ -0.71
GABRB3-205ENST00000545868 HOXA9P31269 272 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 NAMPTP43490 491 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 CLCNKBP51801 687 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 STARD6P59095 220 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 ZNF174Q15697 407 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 MAPK6Q16659 721 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 DCLRE1AQ6PJP8 1040 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 SLC7A14Q8TBB6 771 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 FGF13Q92913 245 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 NACC1Q96RE7 527 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 DDX23Q9BUQ8 820 aaKnown RBP10.59□□□□□ -0.71
GABRB3-205ENST00000545868 DNMT3BQ9UBC3 853 aaKnown RBP10.59□□□□□ -0.71
GABRB3-205ENST00000545868 MTRRQ9UBK8 725 aa10.59□□□□□ -0.71
GABRB3-205ENST00000545868 MTF2Q9Y483 593 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-205ENST00000545868 SHISA7A6NL88 538 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 TMEM189-UBE2V1I3L0A0 370 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 I3L4J1 428 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 POU2F2P09086 479 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 SP9P0CG40 484 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 OR1D2P34982 312 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 BRCC3P46736 316 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 NEK4P51957 841 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 SNW1Q13573 536 aaKnown RBP10.58□□□□□ -0.72
GABRB3-205ENST00000545868 RAB33AQ14088 237 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 UPP1Q16831 310 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 SLC5A9Q2M3M2 681 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 PPM1LQ5SGD2 360 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 AXDND1Q5T1B0 1012 aaPredicted RBP10.58□□□□□ -0.72
GABRB3-205ENST00000545868 LIN9Q5TKA1 542 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.58□□□□□ -0.72
GABRB3-205ENST00000545868 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 TMEM130Q8N3G9 435 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 C4orf32Q8N8J7 132 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 ING5Q8WYH8 240 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 KXD1Q9BQD3 176 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 C2orf40Q9H1Z8 148 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 SIT1Q9Y3P8 196 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 CDY1Q9Y6F8 540 aa10.58□□□□□ -0.72
GABRB3-205ENST00000545868 KMT2BQ9UMN6 2715 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 HELZP42694 1942 aaKnown RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ARHGEF35A5YM69 484 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ABLIM1O14639 778 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 LMNAP02545 664 aaKnown RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 RFX1P22670 979 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ID4P47928 161 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 RBM25P49756 843 aaKnown RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 TRIM29Q14134 588 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 MLF2Q15773 248 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 DCAF4L1Q3SXM0 396 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ATF7IP2Q5U623 682 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ALKAL1Q6UXT8 129 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 DAW1Q8N136 415 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 DEPTORQ8TB45 409 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ADAM32Q8TC27 787 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 BAP1Q92560 729 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 RMDN1Q96DB5 314 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ZMAT2Q96NC0 199 aaKnown RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ADPGKQ9BRR6 497 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ARHGAP9Q9BRR9 750 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 PLA2G2FQ9BZM2 168 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 CDT1Q9H211 546 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 BHMT2Q9H2M3 363 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 PTPRHQ9HD43 1115 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 POLIQ9UNA4 740 aa10.57□□□□□ -0.72
GABRB3-205ENST00000545868 ZFP37Q9Y6Q3 630 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-205ENST00000545868 SMIM28A0A1B0GU29 152 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 WDR27A2RRH5 827 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 PP2D1A8MPX8 630 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 TBC1D4O60343 1298 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 B3GAT3O94766 335 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 CEBPBP17676 345 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 CD72P21854 359 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 ROR1Q01973 937 aa10.56□□□□□ -0.72
GABRB3-205ENST00000545868 ELAVL2Q12926 359 aaKnown RBP10.56□□□□□ -0.72
GABRB3-205ENST00000545868 MAPK7Q13164 816 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms