RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DACT2Q5SW24 774 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 CCDC174Q6PII3 467 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 TRIM72Q6ZMU5 477 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 VSIG1Q86XK7 387 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 APLFQ8IW19 511 aaPredicted RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 ENDOVQ8N8Q3 282 aaKnown RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 ZNF398Q8TD17 642 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 UTP4Q969X6 686 aaKnown RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 ERP27Q96DN0 273 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 VCPIP1Q96JH7 1222 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 RBM15Q96T37 977 aaKnown RBP eCLIP9.29□□□□□ -0.92
TDP1-204ENST00000545686 OSBPL8Q9BZF1 889 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 SSU72Q9NP77 194 aaKnown RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 DNAJC17Q9NVM6 304 aaKnown RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 TBK1Q9UHD2 729 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 TBX20Q9UMR3 447 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 PHTF1Q9UMS5 762 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 TRIM33Q9UPN9 1127 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 R3HDM2Q9Y2K5 976 aaKnown RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 PCDHB2Q9Y5E7 798 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 MYPNQ86TC9 1320 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 SLC16A4O15374 487 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 DHX15O43143 795 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 EDF1O60869 148 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 CYP1A1P04798 512 aaPredicted RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 KRT5P13647 590 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 ITGB5P18084 799 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 GNAZP19086 355 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CALB2P22676 271 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 YWHABP31946 246 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 CETN2P41208 172 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 NSFP46459 744 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 GHRHRQ02643 423 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CYP24A1Q07973 514 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 GRIPAP1Q4V328 841 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 LIN9Q5TKA1 542 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CDCA2Q69YH5 1023 aaPredicted RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 MON1BQ7L1V2 547 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 MAEAQ7L5Y9 396 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 C4orf19Q8IY42 314 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 TAS1R2Q8TE23 839 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 NGLY1Q96IV0 654 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 C9orf72Q96LT7 481 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 PHACTR1Q9C0D0 580 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 KCNH7Q9NS40 1196 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 C1orf112Q9NSG2 853 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CYP39A1Q9NYL5 469 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CHKBQ9Y259 395 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 LRRC42Q9Y546 428 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 PCDHAC2Q9Y5I4 1007 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 GOLGA8IPA6NC78 632 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 GOLGA8JA6NMD2 632 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 DDX39AO00148 427 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 DNALI1O14645 258 aaPredicted RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 TOM1O60784 492 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 PEX11AO75192 247 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 FDX1P10109 184 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 GCAP28676 217 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 PEX3P56589 373 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 GRIK3Q13003 919 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 TAF11Q15544 211 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CCDC142Q17RM4 750 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 SLC27A3Q5K4L6 730 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CAPRIN2Q6IMN6 1127 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 MIS18BP1Q6P0N0 1132 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 FAM47EQ6ZV65 393 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 TMEM161BQ8NDZ6 487 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 STK32AQ8WU08 396 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 CCDC127Q96BQ5 260 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 NAF1Q96HR8 494 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 SMC6Q96SB8 1091 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 TRABDQ9H4I3 376 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 C17orf75Q9HAS0 396 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 AGO4Q9HCK5 861 aaKnown RBP9.28□□□□□ -0.92
TDP1-204ENST00000545686 SAR1AQ9NR31 198 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 ANKEF1Q9NU02 776 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 FETUBQ9UGM5 382 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 SLC24A2Q9UI40 661 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 SCINQ9Y6U3 715 aa9.28□□□□□ -0.92
TDP1-204ENST00000545686 FOXO6A8MYZ6 492 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 LMNAP02545 664 aaKnown RBP9.27□□□□□ -0.93
TDP1-204ENST00000545686 CNGA1P29973 690 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 ECE1P42892 770 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 VPS41P49754 854 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 DMP1Q13316 513 aaPredicted RBP9.27□□□□□ -0.93
TDP1-204ENST00000545686 MORF4L2Q15014 288 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 P3H1Q32P28 736 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 SV2AQ7L0J3 742 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 LDHDQ86WU2 507 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 KIRREL3Q8IZU9 778 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 FBXO41Q8TF61 875 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 C10orf82Q8WW14 230 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 ZNF622Q969S3 477 aaKnown RBP eCLIP9.27□□□□□ -0.93
TDP1-204ENST00000545686 SPDL1Q96EA4 605 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 C8orf37Q96NL8 207 aa9.27□□□□□ -0.93
TDP1-204ENST00000545686 CSRNP1Q96S65 589 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms