RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 INPPL1O15357 1258 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 FGF18O76093 207 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 RECQL4O94761 1208 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 IL18RAPO95256 599 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 ADRB2P07550 413 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 SRGAP2BP0DMP2 458 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 PSMC2P35998 433 aaKnown RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 ACOT2P49753 483 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 STX17P56962 302 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 UBE3AQ05086 875 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 ANO6Q4KMQ2 910 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 XKR4Q5GH76 650 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 SPATA1Q5VX52 437 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 CEP135Q66GS9 1140 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 CRELD2Q6UXH1 353 aaPredicted RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 AGMOQ6ZNB7 445 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 CEP120Q8N960 986 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 RNF169Q8NCN4 708 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 URGCPQ8TCY9 931 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 SAAL1Q96ER3 474 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 RPS6KC1Q96S38 1066 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 DUSP9Q99956 384 aaKnown RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 METTL14Q9HCE5 456 aaKnown RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
LTBR-214ENST00000545445 SORCS3Q9UPU3 1222 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 HES2Q9Y543 173 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 TTC26A0AVF1 554 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 FSD2A1L4K1 749 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 CARNS1A5YM72 827 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 TBKBP1A7MCY6 615 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 C2CD4DB7Z1M9 353 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 IKBKBO14920 756 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 FSCN2O14926 492 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 OFD1O75665 1012 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 AKAP5P24588 427 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 ZNF165P49910 485 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 OSTNP61366 133 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 MYL5Q02045 173 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 PPP2R3AQ06190 1150 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 KCNC3Q14003 757 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
LTBR-214ENST00000545445 SLC10A6Q3KNW5 377 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 ALKAL1Q6UXT8 129 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 LRRC55Q6ZSA7 311 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
LTBR-214ENST00000545445 INTS8Q75QN2 995 aaKnown RBP12.83□□□□□ -0.36
LTBR-214ENST00000545445 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 UBALD2Q8IYN6 164 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 APOL6Q9BWW8 343 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
LTBR-214ENST00000545445 MRPL9Q9BYD2 267 aaKnown RBP12.83□□□□□ -0.36
LTBR-214ENST00000545445 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 TSPY26PQ9H489 355 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 THAP9Q9H5L6 903 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 CNTN3Q9P232 1028 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 DERAQ9Y315 318 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.36
LTBR-214ENST00000545445 MED19A0JLT2 244 aaPredicted RBP12.82□□□□□ -0.36
LTBR-214ENST00000545445 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 ARL5CA6NH57 179 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 BECN2A8MW95 431 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 XPOTO43592 962 aaKnown RBP12.82□□□□□ -0.36
LTBR-214ENST00000545445 AKAP3O75969 853 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 ASGR2P07307 311 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 CXCL8P10145 99 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 KRT13P13646 458 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
LTBR-214ENST00000545445 KCNE1P15382 129 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 TNFSF9P41273 254 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
LTBR-214ENST00000545445 CYP24A1Q07973 514 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 PSMD6Q15008 389 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 SEZ6Q53EL9 994 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 NOMO2Q5JPE7 1267 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 ZBTB41Q5SVQ8 909 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
LTBR-214ENST00000545445 TMEM184AQ6ZMB5 413 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 CBWD2Q8IUF1 395 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 COLGALT1Q8NBJ5 622 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 RDH13Q8NBN7 331 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 LPPQ93052 612 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 MED15Q96RN5 788 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 FNBP1Q96RU3 617 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 GAD1Q99259 594 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 AAASQ9NRG9 546 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 SLC38A7Q9NVC3 462 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 C2CD2Q9Y426 696 aa12.82□□□□□ -0.36
LTBR-214ENST00000545445 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms