RNA–Protein interactions for RNA: ENST00000545202.1

AP000439.3-201, humanhuman

TSL 2 BASIC

Gene AP000439.3, Length 2,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.3-201ENST00000545202 ACTR2P61160 394 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 PTP4A2Q12974 167 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 SNRNP48Q6IEG0 339 aaKnown RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 VSTM1Q6UX27 236 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 SGSM3Q96HU1 749 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 NSRP1Q9H0G5 558 aaKnown RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 KIAA1586Q9HCI6 787 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 ADAM22Q9P0K1 906 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 AGO2Q9UKV8 859 aaKnown RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 DNAJC8O75937 253 aaPredicted RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 FDX1P10109 184 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 CAV1Q03135 178 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 TMEM270Q6UE05 265 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 TAX1BP1Q86VP1 789 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 RHOT1Q8IXI2 618 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 NSUN6Q8TEA1 469 aaKnown RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 HAPLN2Q9GZV7 340 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 APOBEC3GQ9HC16 384 aaKnown RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 NINJ2Q9NZG7 142 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 USTQ9Y2C2 406 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 NEU2Q9Y3R4 380 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 PCDHB4Q9Y5E5 795 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 RLFQ13129 1914 aa16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
AP000439.3-201ENST00000545202 CHUKO15111 745 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 ATP5DP30049 168 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 GJC1P36383 396 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 NOMO3P69849 1222 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 MAMLD1Q13495 774 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 CUL2Q13617 745 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 CCNG2Q16589 344 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 CIAPIN1Q6FI81 312 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 CRELD2Q6UXH1 353 aaPredicted RBP16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 ABHD15Q6UXT9 468 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 TRPM8Q7Z2W7 1104 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 TMEM143Q96AN5 459 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 OSBPL8Q9BZF1 889 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 MLXIPLQ9NP71 852 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 KCNK9Q9NPC2 374 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 CD2APQ9Y5K6 639 aa16.58■□□□□ 0.25
AP000439.3-201ENST00000545202 TCP11X1B4DZS4 312 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 H0YCG3 227 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 PSTPIP1O43586 416 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 SNX3O60493 162 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 CD58P19256 250 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 GNA15P30679 374 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 SSR1P43307 286 aaKnown RBP16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 STRN3Q13033 797 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 ZNF365Q70YC5 407 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 ANKS1BQ7Z6G8 1248 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 PRUNE1Q86TP1 453 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 ABRAQ8N0Z2 381 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 ANKRD42Q8N9B4 389 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 GINM1Q9NU53 330 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 ZNF541Q9H0D2 1346 aa16.58■□□□□ 0.24
AP000439.3-201ENST00000545202 GJB6O95452 261 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 POLGP54098 1239 aaPredicted RBP16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 EMC2Q15006 297 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 ZBTB41Q5SVQ8 909 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 CYP4X1Q8N118 509 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 MRPL47Q9HD33 250 aaKnown RBP16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 FGFR1OP2Q9NVK5 253 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 RBAKQ9NYW8 714 aaPredicted RBP16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 TBK1Q9UHD2 729 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 SLC12A4Q9UP95 1085 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 STYXL1Q9Y6J8 313 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 CETPP11597 493 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 BACE1P56817 501 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 SNCBQ16143 134 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 XKR3Q5GH77 459 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 KATNAL2Q8IYT4 538 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 CCDC89Q8N998 374 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 REPS2Q8NFH8 660 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 ABCF3Q9NUQ8 709 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 NFASCO94856 1347 aa16.57■□□□□ 0.24
AP000439.3-201ENST00000545202 PHIPQ8WWQ0 1821 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 BRAFP15056 766 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 MPP2Q14168 576 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 IZUMO3Q5VZ72 239 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 TRIM72Q6ZMU5 477 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 C9orf72Q96LT7 481 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 ZNF214Q9UL59 606 aaPredicted RBP16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 SRCAPQ6ZRS2 3230 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 LRRIQ4A6NIV6 560 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 TCEA3O75764 348 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 GH1P01241 217 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 GSTA1P08263 222 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 POTEJP0CG39 1038 aa16.56■□□□□ 0.24
AP000439.3-201ENST00000545202 ABCD1P33897 745 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms