RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RARRES1P49788 294 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 EPHA5P54756 1037 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 MLLT6P55198 1093 aaPredicted RBP10.36□□□□□ -0.75
CHD4-212ENST00000545083 SOX4Q06945 474 aaPredicted RBP10.36□□□□□ -0.75
CHD4-212ENST00000545083 TEAD2Q15562 447 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 FAM187BQ17R55 369 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 CYP4A22Q5TCH4 519 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 NEK8Q86SG6 692 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 SKAP1Q86WV1 359 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 TTC8Q8TAM2 541 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 SHKBP1Q8TBC3 707 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 KCNB2Q92953 911 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 LOXL4Q96JB6 756 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 LRRC3BQ96PB8 259 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 C8orf33Q9H7E9 229 aaPredicted RBP10.36□□□□□ -0.75
CHD4-212ENST00000545083 ANKEF1Q9NU02 776 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 SNX14Q9Y5W7 946 aa10.36□□□□□ -0.75
CHD4-212ENST00000545083 SETXQ7Z333 2677 aaKnown RBP10.36□□□□□ -0.75
CHD4-212ENST00000545083 SMG1Q96Q15 3661 aaKnown RBP10.36□□□□□ -0.75
CHD4-212ENST00000545083 DMXL2Q8TDJ6 3036 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 FAM205CA6NFA0 338 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 SPECC1L-ADORA2AF8WAN1 911 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 N4BP3O15049 544 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 RPP40O75818 363 aaKnown RBP10.35□□□□□ -0.75
CHD4-212ENST00000545083 DEXIO95424 95 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 GCFC2P16383 781 aaKnown RBP10.35□□□□□ -0.75
CHD4-212ENST00000545083 NOVA1P51513 510 aaKnown RBP10.35□□□□□ -0.75
CHD4-212ENST00000545083 KPNA1P52294 538 aaPredicted RBP10.35□□□□□ -0.75
CHD4-212ENST00000545083 EVCP57679 992 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 SSRP1Q08945 709 aaKnown RBP10.35□□□□□ -0.75
CHD4-212ENST00000545083 FCHO2Q0JRZ9 810 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 TWF1Q12792 350 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 FOXC1Q12948 553 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 CCINQ13939 588 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 PON2Q15165 354 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 EARS2Q5JPH6 523 aaKnown RBP10.35□□□□□ -0.75
CHD4-212ENST00000545083 DGKKQ5KSL6 1271 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 BLOC1S2Q6QNY1 142 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 CACNA2D4Q7Z3S7 1137 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 CSGALNACT1Q8TDX6 532 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 GAB3Q8WWW8 586 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 ZFYVE19Q96K21 471 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 CCDC113Q9H0I3 377 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 GJB4Q9NTQ9 266 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 GTSE1Q9NYZ3 720 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 FBXL5Q9UKA1 691 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 LAMA5O15230 3695 aa10.35□□□□□ -0.75
CHD4-212ENST00000545083 CCDC194A0A1B0GVG4 234 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 SRRM3A6NNA2 597 aaPredicted RBP10.34□□□□□ -0.75
CHD4-212ENST00000545083 CHADO15335 359 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 TRAPPC3O43617 180 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 MARCH6O60337 910 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 DTNBO60941 627 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 LIG1P18858 919 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 MPLP40238 635 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 ZNF252P-AS1Q0IIN9 211 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 PRPF4BQ13523 1007 aaKnown RBP10.34□□□□□ -0.75
CHD4-212ENST00000545083 MRPL58Q14197 206 aaKnown RBP10.34□□□□□ -0.75
CHD4-212ENST00000545083 TMEM132AQ24JP5 1023 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 STXBP5Q5T5C0 1151 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 RNF43Q68DV7 783 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 IQCEQ6IPM2 695 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 GALNT17Q6IS24 598 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 YAF2Q8IY57 180 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 GATA6Q92908 595 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 MSANTD3Q96H12 275 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 ZNF512Q96ME7 567 aaPredicted RBP10.34□□□□□ -0.75
CHD4-212ENST00000545083 UROC1Q96N76 676 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 LRRC3Q9BY71 257 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 SLITRK6Q9H5Y7 841 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 ASAH2Q9NR71 780 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
CHD4-212ENST00000545083 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 ITPR1Q14643 2758 aa10.34□□□□□ -0.75
CHD4-212ENST00000545083 SMIM28A0A1B0GU29 152 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 A0A1W2PRU2 124 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 C4orf47A7E2U8 309 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 ACKR2O00590 384 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 PODXLO00592 558 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 VNN2O95498 520 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 RING1Q06587 406 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 TNK2Q07912 1038 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 TOB2Q14106 344 aaPredicted RBP10.33□□□□□ -0.76
CHD4-212ENST00000545083 MAPK6Q16659 721 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 TPGS2Q68CL5 300 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 C1orf228Q6PIY5 440 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 RALGPS2Q86X27 583 aaPredicted RBP10.33□□□□□ -0.76
CHD4-212ENST00000545083 TMC8Q8IU68 726 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 ARID3BQ8IVW6 561 aaPredicted RBP10.33□□□□□ -0.76
CHD4-212ENST00000545083 ZBTB8OSQ8IWT0 167 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 ELMOD1Q8N336 334 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 CEP120Q8N960 986 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 E2F7Q96AV8 911 aa10.33□□□□□ -0.76
CHD4-212ENST00000545083 CCDC43Q96MW1 224 aaKnown RBP10.33□□□□□ -0.76
CHD4-212ENST00000545083 ZMAT2Q96NC0 199 aaKnown RBP10.33□□□□□ -0.76
CHD4-212ENST00000545083 ADPGKQ9BRR6 497 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms