RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 LLGL1Q15334 1064 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 FAM102AQ5T9C2 384 aaPredicted RBP5.36□□□□□ -1.55
RAP1B-231ENST00000544639 SWSAP1Q6NVH7 229 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 COL23A1Q86Y22 540 aaPredicted RBP5.36□□□□□ -1.55
RAP1B-231ENST00000544639 ZFPM1Q8IX07 1006 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 FAM43AQ8N2R8 423 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 FITM2Q8N6M3 262 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 BRIX1Q8TDN6 353 aaKnown RBP5.36□□□□□ -1.55
RAP1B-231ENST00000544639 NT5C1BQ96P26 610 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 NEU1Q99519 415 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 RLIMQ9NVW2 624 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 STAP2Q9UGK3 403 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 L1RE1Q9UN81 338 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 TSC22D4Q9Y3Q8 395 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 PCDHA1Q9Y5I3 950 aa5.36□□□□□ -1.55
RAP1B-231ENST00000544639 CAPN8A6NHC0 703 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 TRIM24O15164 1050 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 PRSS23O95084 383 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 AHSGP02765 367 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 RHCEP18577 417 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 GCSHP23434 173 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 PTTG1IPP53801 180 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 GPSM2P81274 684 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 RHDQ02161 417 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 TOB2Q14106 344 aaPredicted RBP5.35□□□□□ -1.55
RAP1B-231ENST00000544639 SPDYAQ5MJ70 313 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 AGAP9Q5VTM2 703 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 NOL8Q76FK4 1167 aaKnown RBP5.35□□□□□ -1.55
RAP1B-231ENST00000544639 MAEAQ7L5Y9 396 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 TMPRSS6Q8IU80 811 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 RHOT2Q8IXI1 618 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 CELF5Q8N6W0 485 aaKnown RBP5.35□□□□□ -1.55
RAP1B-231ENST00000544639 FAM156AQ8NDB6 213 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 IL17DQ8TAD2 202 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 PHACTR3Q96KR7 559 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 ZMAT3Q9HA38 289 aaKnown RBP5.35□□□□□ -1.55
RAP1B-231ENST00000544639 ATP6V0A4Q9HBG4 840 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 DDX21Q9NR30 783 aaKnown RBP eCLIP5.35□□□□□ -1.55
RAP1B-231ENST00000544639 EIF2B4Q9UI10 523 aaKnown RBP5.35□□□□□ -1.55
RAP1B-231ENST00000544639 ZDHHC8Q9ULC8 765 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 CHST2Q9Y4C5 530 aa5.35□□□□□ -1.55
RAP1B-231ENST00000544639 PRSS29PA6NIE9 313 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 DIRC3C9JPN6 131 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 AKAP8O43823 692 aaKnown RBP5.34□□□□□ -1.55
RAP1B-231ENST00000544639 CAND2O75155 1236 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 AGFG2O95081 481 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 ANXA1P04083 346 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 GJB1P08034 283 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 GNAI3P08754 354 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 RNASE9P60153 205 aaKnown RBP5.34□□□□□ -1.55
RAP1B-231ENST00000544639 GNAI1P63096 354 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 SLFN5Q08AF3 891 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 KIF22Q14807 665 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 CNN3Q15417 329 aaKnown RBP5.34□□□□□ -1.55
RAP1B-231ENST00000544639 UTP14CQ5TAP6 766 aaKnown RBP5.34□□□□□ -1.55
RAP1B-231ENST00000544639 EMC10Q5UCC4 262 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 CCDC149Q6ZUS6 474 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 PDSS2Q86YH6 399 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 TBC1D15Q8TC07 691 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 TNPO1Q92973 898 aaKnown RBP5.34□□□□□ -1.55
RAP1B-231ENST00000544639 TTC17Q96AE7 1141 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 MRGPRX1Q96LB2 322 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 DCLRE1CQ96SD1 692 aaKnown RBP5.34□□□□□ -1.55
RAP1B-231ENST00000544639 PCGF6Q9BYE7 350 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 BRD9Q9H8M2 597 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 SLAMF7Q9NQ25 335 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 CEP72Q9P209 647 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 CFAP97Q9P2B7 532 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 SORCS3Q9UPU3 1222 aa5.34□□□□□ -1.55
RAP1B-231ENST00000544639 AHRRA9YTQ3 701 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 PLSCR1O15162 318 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 ZNF185O15231 689 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 RARBP10826 455 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 CACNB3P54284 484 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 NOMO3P69849 1222 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 FAM193AP78312 1265 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 USP39Q53GS9 565 aaKnown RBP5.33□□□□□ -1.56
RAP1B-231ENST00000544639 RABL3Q5HYI8 236 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 NOMO2Q5JPE7 1267 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 KHDC1LQ5JSQ8 128 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 CCSAPQ6IQ19 270 aaPredicted RBP5.33□□□□□ -1.56
RAP1B-231ENST00000544639 GDF7Q7Z4P5 450 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 AOPEPQ8N6M6 819 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 TMIEQ8NEW7 156 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 OR56A1Q8NGH5 318 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 EXTL1Q92935 676 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 KLHL32Q96NJ5 620 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 SARGQ9BW04 601 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 C22orf23Q9BZE7 217 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 REXO4Q9GZR2 422 aaKnown RBP5.33□□□□□ -1.56
RAP1B-231ENST00000544639 BHMT2Q9H2M3 363 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 ZNF703Q9H7S9 590 aaPredicted RBP5.33□□□□□ -1.56
RAP1B-231ENST00000544639 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
RAP1B-231ENST00000544639 KLHL11Q9NVR0 708 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 CPA4Q9UI42 421 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 PCDHA6Q9UN73 950 aa5.33□□□□□ -1.56
RAP1B-231ENST00000544639 USP15Q9Y4E8 981 aaPredicted RBP5.33□□□□□ -1.56
RAP1B-231ENST00000544639 A0A1W2PPL8 197 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms