RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 POTEJP0CG39 1038 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 TMOD1P28289 359 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 TNFSF9P41273 254 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 PTP4A2Q12974 167 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 MAMLD1Q13495 774 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 SNX1Q13596 522 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 R3HDM1Q15032 1099 aaKnown RBP19.19■□□□□ 0.66
VIM-209ENST00000544301 UBAP2Q5T6F2 1119 aaKnown RBP19.19■□□□□ 0.66
VIM-209ENST00000544301 DAB2IPQ5VWQ8 1189 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 MYCBPAPQ8TBZ2 947 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 ZNF473Q8WTR7 871 aaKnown RBP19.19■□□□□ 0.66
VIM-209ENST00000544301 MAIP1Q8WWC4 291 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 CCT8L2Q96SF2 557 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 FAM129AQ9BZQ8 928 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 FAM107BQ9H098 131 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 CCDC113Q9H0I3 377 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 R3HDMLQ9H3Y0 253 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 CHST7Q9NS84 486 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 CSADQ9Y600 493 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 EFNA5P52803 228 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 PPARDQ03181 441 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 KRT17Q04695 432 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 SLMAPQ14BN4 828 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 PLEKHA7Q6IQ23 1121 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 B4GALNT4Q76KP1 1039 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 ZBTB33Q86T24 672 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 UBR7Q8N806 425 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 PAGR1Q9BTK6 254 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 MRPL4Q9BYD3 311 aaKnown RBP19.19■□□□□ 0.66
VIM-209ENST00000544301 RASSF4Q9H2L5 321 aa19.19■□□□□ 0.66
VIM-209ENST00000544301 MRPL47Q9HD33 250 aaKnown RBP19.19■□□□□ 0.66
VIM-209ENST00000544301 E7EVH7 732 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 CST3P01034 146 aaPredicted RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 RARGP13631 454 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 ZNF132P52740 706 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 IER5Q5VY09 327 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 MMS22LQ6ZRQ5 1243 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 ATG4AQ8WYN0 398 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 FAM167AQ96KS9 214 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 AZI2Q9H6S1 392 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 PPANQ9NQ55 473 aaKnown RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 PPME1Q9Y570 386 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 O00370 1275 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 PSTPIP1O43586 416 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 TOM1L1O75674 476 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 CNMDO75829 334 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 ARIH2O95376 493 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 FAM107AO95990 144 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 FGFR4P22455 802 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 MAGEA9P43362 315 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 AP3M2P53677 418 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 IRX3P78415 501 aaPredicted RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 C1QBPQ07021 282 aaKnown RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 LAMTOR4Q0VGL1 99 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 GRM1Q13255 1194 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 MKRN4PQ13434 485 aaPredicted RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 BYSLQ13895 437 aaKnown RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 CDCA2Q69YH5 1023 aaPredicted RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.18■□□□□ 0.66
VIM-209ENST00000544301 WDR49Q8IV35 697 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 PGM2Q96G03 612 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 ACO2Q99798 780 aaKnown RBP19.18■□□□□ 0.66
VIM-209ENST00000544301 TCHPQ9BT92 498 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 DCLK3Q9C098 648 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 WHRNQ9P202 907 aa19.18■□□□□ 0.66
VIM-209ENST00000544301 PAPPA2Q9BXP8 1791 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 OTOFQ9HC10 1997 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 A0A0G2JLL6 359 aaPredicted RBP19.17■□□□□ 0.66
VIM-209ENST00000544301 SOCS7O14512 581 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 IRF6O14896 467 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 TP73O15350 636 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 RIPK2O43353 540 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 ASS1P00966 412 aaKnown RBP19.17■□□□□ 0.66
VIM-209ENST00000544301 PAEPP09466 180 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 SRGAP2CP0DJJ0 459 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 MARK3P27448 753 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 TAS2R40P59535 323 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 CALCOCO2Q13137 446 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 PPP1R2P3Q6NXS1 205 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 PRRT2Q7Z6L0 340 aaPredicted RBP19.17■□□□□ 0.66
VIM-209ENST00000544301 RHOT1Q8IXI2 618 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.17■□□□□ 0.66
VIM-209ENST00000544301 BBXQ8WY36 941 aaPredicted RBP19.17■□□□□ 0.66
VIM-209ENST00000544301 IMPG2Q9BZV3 1241 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 SCINQ9Y6U3 715 aa19.17■□□□□ 0.66
VIM-209ENST00000544301 ADM5C9JUS6 153 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 TRAPPC3O43617 180 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 SYDE1Q6ZW31 735 aaPredicted RBP19.16■□□□□ 0.66
VIM-209ENST00000544301 ZNF606Q8WXB4 792 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 GPR20Q99678 358 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 TMEM109Q9BVC6 243 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 ASCC2Q9H1I8 757 aaPredicted RBP19.16■□□□□ 0.66
VIM-209ENST00000544301 R3HDM2Q9Y2K5 976 aaKnown RBP19.16■□□□□ 0.66
VIM-209ENST00000544301 GMNCA6NCL1 334 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 ZBTB42B2RXF5 422 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 PRKCBP05771 671 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 RALAP11233 206 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 MAN1A1P33908 653 aa19.16■□□□□ 0.66
VIM-209ENST00000544301 KLF1Q13351 362 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms