RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 EEF1DP3Q658K8 133 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 PPP1R2P3Q6NXS1 205 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 ADAT2Q7Z6V5 191 aaKnown RBP18.22■□□□□ 0.51
PTPRO-209ENST00000543886 CD101Q93033 1021 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 CYFIP2Q96F07 1278 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 ANKRD36BP1Q96IX9 119 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 NIF3L1Q9GZT8 377 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 CDT1Q9H211 546 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 RPF1Q9H9Y2 349 aaKnown RBP18.22■□□□□ 0.51
PTPRO-209ENST00000543886 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.22■□□□□ 0.51
PTPRO-209ENST00000543886 PPFIA4O75335 1185 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 IL18RAPO95256 599 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 HOXC6P09630 235 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 FAM110CQ1W6H9 321 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 PLEKHH3Q7Z736 793 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 CDR2LQ86X02 465 aaPredicted RBP18.22■□□□□ 0.51
PTPRO-209ENST00000543886 PASD1Q8IV76 773 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 MAML3Q96JK9 1138 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 IFT122Q9HBG6 1241 aa18.22■□□□□ 0.51
PTPRO-209ENST00000543886 B4GALT4O60513 344 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 HSF2BPO75031 334 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 SYF2O95926 243 aaKnown RBP18.21■□□□□ 0.51
PTPRO-209ENST00000543886 RRM1P23921 792 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 PEX5P50542 639 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 GUCY2FP51841 1108 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 ZNF699Q32M78 642 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 MON1BQ7L1V2 547 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 PPP1R16BQ96T49 567 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 RUFY1Q96T51 708 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 C16orf70Q9BSU1 422 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 UTP11Q9Y3A2 253 aaKnown RBP18.21■□□□□ 0.51
PTPRO-209ENST00000543886 PCDHA3Q9Y5H8 950 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 H3BRB1 525 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 TTI1O43156 1089 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 RNF40O75150 1001 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 FAM153BP0C7A2 387 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 ZNF132P52740 706 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 GYS2P54840 703 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 NOMO3P69849 1222 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 TRADDQ15628 312 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 FAM187BQ17R55 369 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 FAM153CQ494X1 144 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 ALS2CLQ60I27 953 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 SCARA3Q6AZY7 606 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 EFCAB13Q8IY85 973 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 UBR7Q8N806 425 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 CEP120Q8N960 986 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
PTPRO-209ENST00000543886 FAM153AQ9UHL3 310 aa18.21■□□□□ 0.51
PTPRO-209ENST00000543886 A0A087WZ62 844 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 ZEB2O60315 1214 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 IQCF3P0C7M6 154 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 CXCL8P10145 99 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 SMPD1P17405 629 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 CD58P19256 250 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 RWDD2BP57060 319 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 TNFAIP2Q03169 654 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 DUSP28Q4G0W2 176 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 AADACL2Q6P093 401 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 GOLGA6L1Q8N7Z2 621 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 TSEN2Q8NCE0 465 aaKnown RBP18.2■□□□□ 0.5
PTPRO-209ENST00000543886 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 SCLT1Q96NL6 688 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 FDXACB1Q9BRP7 624 aaPredicted RBP18.2■□□□□ 0.5
PTPRO-209ENST00000543886 C11orf70Q9BRQ4 267 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 TINF2Q9BSI4 451 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 ABHD16BQ9H3Z7 469 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 ADAM22Q9P0K1 906 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 NR2E1Q9Y466 385 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 ANK1P16157 1881 aa18.2■□□□□ 0.5
PTPRO-209ENST00000543886 VTNP04004 478 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 CFHP08603 1231 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 SSTR3P32745 418 aaPredicted RBP18.19■□□□□ 0.5
PTPRO-209ENST00000543886 DR1Q01658 176 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 PPFIA1Q13136 1202 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 MTHFD1LQ6UB35 978 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 PHLDB2Q86SQ0 1253 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 CPNE8Q86YQ8 564 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 IFNLR1Q8IU57 520 aaPredicted RBP18.19■□□□□ 0.5
PTPRO-209ENST00000543886 VCPIP1Q96JH7 1222 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 PTPN18Q99952 460 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 PLVAPQ9BX97 442 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 CELF4Q9BZC1 486 aaKnown RBP18.19■□□□□ 0.5
PTPRO-209ENST00000543886 RAB17Q9H0T7 212 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 CALCOCO1Q9P1Z2 691 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 ADAM21Q9UKJ8 722 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 MROH7Q68CQ1 1323 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 AGPSO00116 658 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 MYO1FO00160 1098 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 MMP3P08254 477 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 MCF2P10911 925 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 PYGMP11217 842 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 YWHAEP62258 255 aaKnown RBP18.19■□□□□ 0.5
PTPRO-209ENST00000543886 ACVR2BQ13705 512 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 PHF13Q86YI8 300 aaPredicted RBP18.19■□□□□ 0.5
PTPRO-209ENST00000543886 MREGQ8N565 214 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 NLRP7Q8WX94 980 aa18.19■□□□□ 0.5
PTPRO-209ENST00000543886 MRPL47Q9HD33 250 aaKnown RBP18.19■□□□□ 0.5
PTPRO-209ENST00000543886 ERVK-5Q9HDB9 667 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms