RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ARMCX3Q9UH62 379 aaPredicted RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 ITGA11Q9UKX5 1188 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 ARHGEF37A1IGU5 675 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 EPOPA6NHQ4 379 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 SPDYE4A6NLX3 237 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 SMTNL1A8MU46 457 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 BECN2A8MW95 431 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 F8W810 466 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 I3L4J1 428 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 MAPK13O15264 365 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 GRM6O15303 877 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 MEFVO15553 781 aaPredicted RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 CXCL14O95715 111 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 LINC00271P0C7V0 271 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 CDK11BP21127 795 aaKnown RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 LRPAP1P30533 357 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 PNPLA4P41247 253 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 PIK3CAP42336 1068 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 BRCC3P46736 316 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 GCLMP48507 274 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 GLUD2P49448 558 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 TAF6P49848 677 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 TPM4P67936 248 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 DLG4P78352 724 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 CETN1Q12798 172 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 SMC1AQ14683 1233 aaKnown RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 SKIV2LQ15477 1246 aaKnown RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 NAB2Q15742 525 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 ZBTB6Q15916 424 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 USP41Q3LFD5 358 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 HSP90AA4PQ58FG1 418 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 FAM171A1Q5VUB5 890 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 C9orf57Q5W0N0 161 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 EP400NLQ6ZTU2 488 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 C11orf57Q6ZUT1 292 aaPredicted RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 TRAPPC11Q7Z392 1133 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 FRMD5Q7Z6J6 570 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 DDX53Q86TM3 631 aaKnown RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 TMEM173Q86WV6 379 aaPredicted RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 METTL23Q86XA0 190 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 TMEM130Q8N3G9 435 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 C1orf127Q8N9H9 656 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 ANKRD20A12PQ8NF67 263 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 OR5B17Q8NGF7 314 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 TMC2Q8TDI7 906 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 PARD3BQ8TEW8 1205 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 TMEM174Q8WUU8 243 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 RIN2Q8WYP3 895 aaPredicted RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 MRPL38Q96DV4 380 aaKnown RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 FAM84AQ96KN4 292 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 CNOT6LQ96LI5 555 aaKnown RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 CDX2Q99626 313 aaPredicted RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 HERC2P3Q9BVR0 1158 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 IMPG2Q9BZV3 1241 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 IGFLR1Q9H665 355 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 MRPL17Q9NRX2 175 aaKnown RBP6.81□□□□□ -1.32
LTBR-212ENST00000543542 MARCH5Q9NX47 278 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 LZTS1Q9Y250 596 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 SSX2IPQ9Y2D8 614 aa6.81□□□□□ -1.32
LTBR-212ENST00000543542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.81□□□□□ -1.32
LTBR-212ENST00000543542 RANBP2P49792 3224 aaKnown RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 PTPRJQ12913 1337 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 KPNA7A9QM74 516 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 TMEM189-UBE2V1I3L0A0 370 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 PPEF2O14830 753 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 IKBKBO14920 756 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 HUS1O60921 280 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 SOD2P04179 222 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 ODC1P11926 461 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 PRKCSHP14314 528 aaPredicted RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 PAX3P23760 479 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 MXI1P50539 228 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 LILRA4P59901 499 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 ERVFC1P60507 584 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 TNNC1P63316 161 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 MYL5Q02045 173 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 NCOA4Q13772 614 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 CCDC85BQ15834 202 aaPredicted RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 PSMD5Q16401 504 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 ZNF699Q32M78 642 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 TIGD5Q53EQ6 642 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 KRT39Q6A163 491 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 PDE12Q6L8Q7 609 aaKnown RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 PDXDC1Q6P996 788 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 FOXR2Q6PJQ5 311 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 TAS1R1Q7RTX1 841 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 RBM23Q86U06 439 aaKnown RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 GLYCTKQ8IVS8 523 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 AOPEPQ8N6M6 819 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 LRRC52Q8N7C0 313 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 APPL2Q8NEU8 664 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 ENOX1Q8TC92 643 aaKnown RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 PLEKHO2Q8TD55 490 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 BCL7CQ8WUZ0 217 aaPredicted RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 AUTS2Q8WXX7 1259 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 ZNF516Q92618 1163 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 HPDLQ96IR7 371 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms