RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 COL4A3BPQ9Y5P4 624 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 SMCHD1A6NHR9 2005 aa11.96□□□□□ -0.5
CDH4-201ENST00000543233 SPECC1L-ADORA2AF8WAN1 911 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 PGM3O95394 542 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
CDH4-201ENST00000543233 FKBP3Q00688 224 aaKnown RBP11.95□□□□□ -0.5
CDH4-201ENST00000543233 CYTH1Q15438 398 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 IZUMO2Q6UXV1 221 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 ANO5Q75V66 913 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 SCFD1Q8WVM8 642 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 NRG4Q8WWG1 115 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 TLCD1Q96CP7 247 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 CYTH2Q99418 400 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 GLIS2Q9BZE0 524 aaPredicted RBP11.95□□□□□ -0.5
CDH4-201ENST00000543233 TMOD2Q9NZR1 351 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 SELENONQ9NZV5 590 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 PRR12Q9ULL5 1215 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
CDH4-201ENST00000543233 CARD8Q9Y2G2 431 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 TRIM64CA6NLI5 447 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 KCNK3O14649 394 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 CBX6O95503 412 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 NR2F2P24468 414 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 SERPINB8P50452 374 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 SEPT6Q14141 434 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 KRT72Q14CN4 511 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 WASHC2DQ5SRD0 308 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 RFWD3Q6PCD5 774 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 KLHL35Q6PF15 583 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 TMC3Q7Z5M5 1100 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 LRRC43Q8N309 656 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 LARGE2Q8N3Y3 721 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 ERGIC2Q96RQ1 377 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 TMEM39BQ9GZU3 492 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 KIAA1683Q9H0B3 1180 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 SYNCQ9H7C4 482 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 HOMER2Q9NSB8 354 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 NYAP2Q9P242 653 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 DNM3Q9UQ16 869 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 SIK3Q9Y2K2 1263 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 TIMM22Q9Y584 194 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 EML1O00423 815 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 TXNDC9O14530 226 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 FGFR1OPO95684 399 aaKnown RBP11.95□□□□□ -0.5
CDH4-201ENST00000543233 MYBP10242 640 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 DGKZQ13574 1117 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 ARSHQ5FYA8 562 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 KLHDC7AQ5VTJ3 777 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 PPP1R18Q6NYC8 613 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 DCAF4Q8WV16 495 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 MTMR8Q96EF0 704 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 SLC7A5P2Q9GIP4 190 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 NT5C3AQ9H0P0 336 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 DKK3Q9UBP4 350 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
CDH4-201ENST00000543233 CCDC169A6NNP5 214 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 O00370 1275 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 PALMO75781 387 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 GCNT3O95395 438 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 BAG2O95816 211 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 CCNB1P14635 433 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 MMP13P45452 471 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 OCRLQ01968 901 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 LRRC63Q05C16 580 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 KCNMA1Q12791 1236 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 PARP6Q2NL67 630 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 CPXCR1Q8N123 301 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 TRPC7Q9HCX4 862 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 AASDHPPTQ9NRN7 309 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 HESX1Q9UBX0 185 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 FBP2O00757 339 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 MSH4O15457 936 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 XPOTO43592 962 aaKnown RBP11.94□□□□□ -0.5
CDH4-201ENST00000543233 EIF3BP55884 814 aaKnown RBP11.94□□□□□ -0.5
CDH4-201ENST00000543233 BTKQ06187 659 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 LRP8Q14114 963 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 MEA1Q16626 185 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 BHMTQ93088 406 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 NAP1L3Q99457 506 aaPredicted RBP11.94□□□□□ -0.5
CDH4-201ENST00000543233 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 LRMDAQ9H2I8 198 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 AMACRQ9UHK6 382 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 SALL4Q9UJQ4 1053 aa11.94□□□□□ -0.5
CDH4-201ENST00000543233 DBR1Q9UK59 544 aaKnown RBP11.94□□□□□ -0.5
CDH4-201ENST00000543233 TIMM44O43615 452 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 ENDOUP21128 410 aaKnown RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 RGS2P41220 211 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 SLC34A1Q06495 639 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 PPP2R5CQ13362 524 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 GSTA3Q16772 222 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 WDR72Q3MJ13 1102 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 RDH13Q8NBN7 331 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 RUSC1Q9BVN2 902 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 LRRC27Q9C0I9 530 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 GOLPH3Q9H4A6 298 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 DNAJC17Q9NVM6 304 aaKnown RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 ADAMTS1Q9UHI8 967 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 PLAGL2Q9UPG8 496 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms