RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 RGS9O75916 674 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 ALBP02768 609 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 MARCKSP29966 332 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 DDIT3P35638 169 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CCT6AP40227 531 aaKnown RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 HTR3AP46098 478 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PPM1FP49593 454 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 KRT85P78386 507 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PRKCEQ02156 737 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CYP4A11Q02928 519 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 TLE2Q04725 743 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CTTNQ14247 550 aaKnown RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 SLC39A14Q15043 492 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PTPAQ15257 358 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CCDC85BQ15834 202 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 GRIK4Q16099 956 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 IL17AQ16552 155 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PTGISQ16647 500 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 UGCGQ16739 394 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 ZNF484Q5JVG2 852 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PEAR1Q5VY43 1037 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 KRT79Q5XKE5 535 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 ANKRD33Q7Z3H0 272 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 RELL1Q8IUW5 271 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 C7orf61Q8IZ16 206 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PJA1Q8NG27 643 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 ATP8B4Q8TF62 1192 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 BTBD6Q96KE9 485 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 LXNQ9BS40 222 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 TRMT13Q9NUP7 481 aaKnown RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 SETD4Q9NVD3 440 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 RGL1Q9NZL6 768 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 GTF2IRD1Q9UHL9 959 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 NRCAMQ92823 1304 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 IGSF9BQ9UPX0 1349 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 A0A1W2PP55 124 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 SPTLC2O15270 562 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 B4GALT4O60513 344 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 FBXO24O75426 580 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 SMNDC1O75940 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 SLITRK3O94933 977 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 YEATS4O95619 227 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CLTBP09497 229 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 INSRRP14616 1297 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 LONP1P36776 959 aaKnown RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 ZRSR1Q15695 479 aaKnown RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 XKR3Q5GH77 459 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CEP135Q66GS9 1140 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 MRM1Q6IN84 353 aaKnown RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 GDF6Q6KF10 455 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 OTUD6AQ7L8S5 288 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 FAM126BQ8IXS8 530 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 C4orf19Q8IY42 314 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 IGSF22Q8N9C0 903 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 LINC00301Q8NCQ3 95 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 RASSF8Q8NHQ8 419 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 KCNG4Q8TDN1 519 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 AK8Q96MA6 479 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CCDC43Q96MW1 224 aaKnown RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 HSD17B14Q9BPX1 270 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 POLR3CQ9BUI4 534 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 SARGQ9BW04 601 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PBX4Q9BYU1 374 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 TRPV6Q9H1D0 765 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 TUFT1Q9NNX1 390 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 PRDM5Q9NQX1 630 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 TMEM39AQ9NV64 488 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 DZANK1Q9NVP4 752 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 CHMP5Q9NZZ3 219 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 FRRS1LQ9P0K9 344 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 POLG2Q9UHN1 485 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 EVLQ9UI08 416 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-217ENST00000543205 GTF2A1LQ9UNN4 478 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 STARD13Q9Y3M8 1113 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 NR2E3Q9Y5X4 410 aa5.64□□□□□ -1.51
CLIP1-217ENST00000543205 DOCK5Q9H7D0 1870 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 GOLGA6CA6NDK9 693 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 GOLGA6BA6NDN3 693 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 PP2D1A8MPX8 630 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 M0R082 166 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 ZNF862O60290 1169 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 PPP6R2O75170 966 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 MED24O75448 989 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 CD4P01730 458 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 GOLGA6DP0CG33 693 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 MUTP22033 750 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 RPA1P27694 616 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 CDC25AP30304 524 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 YWHABP31946 246 aaKnown RBP5.63□□□□□ -1.51
CLIP1-217ENST00000543205 UBA7P41226 1012 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 ME1P48163 572 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 GIPRP48546 466 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 FAM193AP78312 1265 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 ZNF200P98182 395 aaPredicted RBP5.63□□□□□ -1.51
CLIP1-217ENST00000543205 FAAP100Q0VG06 881 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 ARMC3Q5W041 872 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 PDXDC1Q6P996 788 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 LVRNQ6Q4G3 990 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 CATSPER3Q86XQ3 398 aa5.63□□□□□ -1.51
CLIP1-217ENST00000543205 C3orf58Q8NDZ4 430 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms