RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 ZCCHC18P0CG32 403 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 ESRRAP11474 423 aaPredicted RBP10.3□□□□□ -0.76
TCF4-208ENST00000543082 VPS41P49754 854 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 NEK3P51956 506 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 RAP1GDS1P52306 607 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 SPIRE1Q08AE8 756 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 USP4Q13107 963 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 CERKLQ49MI3 558 aaPredicted RBP10.3□□□□□ -0.76
TCF4-208ENST00000543082 C6orf163Q5TEZ5 329 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 LVRNQ6Q4G3 990 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 STXBP4Q6ZWJ1 553 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 CPNE8Q86YQ8 564 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 C4orf33Q8N1A6 199 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 PPP2R3CQ969Q6 453 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 TUBGCP5Q96RT8 1024 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 ECSITQ9BQ95 431 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 JMJD4Q9H9V9 463 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 UBE2TQ9NPD8 197 aaPredicted RBP10.3□□□□□ -0.76
TCF4-208ENST00000543082 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 HEY2Q9UBP5 337 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 CIDEBQ9UHD4 219 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 WASF2Q9Y6W5 498 aa10.3□□□□□ -0.76
TCF4-208ENST00000543082 RBBP6Q7Z6E9 1792 aaKnown RBP10.3□□□□□ -0.76
TCF4-208ENST00000543082 FOCADQ5VW36 1801 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 TBX3O15119 743 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PPP1R11O60927 126 aaPredicted RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 ZBED4O75132 1171 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 FAM13AO94988 1023 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 LDHCP07864 332 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 SPATA31C1P0DKV0 1188 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 SNHG28P0DPA3 235 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 ANPEPP15144 967 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PGM1P36871 562 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 CYP2J2P51589 502 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 CDK16Q00536 496 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 CETN1Q12798 172 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 BFSP1Q12934 665 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 FAM91A1Q658Y4 838 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 TBC1D9BQ66K14 1250 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 RINLQ6ZS11 566 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 SYCP3Q8IZU3 236 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 KCTD17Q8N5Z5 321 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 RFWD2Q8NHY2 731 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 LMO3Q8TAP4 145 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 WDR66Q8TBY9 1149 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 SKA1Q96BD8 255 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 IWS1Q96ST2 819 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 DMAC2Q9NW81 257 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 NDE1Q9NXR1 346 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 GALNT8Q9NY28 637 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 CHORDC1Q9UHD1 332 aaPredicted RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 SLC24A2Q9UI40 661 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 DCTN4Q9UJW0 460 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 MTO1Q9Y2Z2 717 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 NEU2Q9Y3R4 380 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 POC1B-GALNT4F8VUJ3 575 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 MAGEC1O60732 1142 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 CIB2O75838 187 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PABPC4LP0CB38 370 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 RARBP10826 455 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PLS3P13797 630 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 CRABP2P29373 138 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 ARFIP2P53365 341 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 ZBTB16Q05516 673 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 SEPT7Q16181 437 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 TRMT5Q32P41 509 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 PLEKHG4Q58EX7 1191 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 ACBD5Q5T8D3 534 aaPredicted RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 ACAD11Q709F0 780 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 NET1Q7Z628 596 aaPredicted RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 ANKS1BQ7Z6G8 1248 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PHLDB2Q86SQ0 1253 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 ADGRF4Q8IZF3 695 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.29□□□□□ -0.76
TCF4-208ENST00000543082 ETNPPLQ8TBG4 499 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 NAT14Q8WUY8 206 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 CELF1Q92879 486 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 HIC2Q96JB3 615 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 UIMC1Q96RL1 719 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PCDHB18PQ96TA0 734 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 DDX50Q9BQ39 737 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 BHMT2Q9H2M3 363 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PREBQ9HCU5 417 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 SAYSD1Q9NPB0 183 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 STK32BQ9NY57 414 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 TAS2R1Q9NYW7 299 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 PSMC3IPQ9P2W1 217 aaPredicted RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 NOCTQ9UK39 431 aaKnown RBP10.29□□□□□ -0.76
TCF4-208ENST00000543082 ZNF652Q9Y2D9 606 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 RABGAP1Q9Y3P9 1069 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 NUMBLQ9Y6R0 609 aa10.29□□□□□ -0.76
TCF4-208ENST00000543082 ATRNL1Q5VV63 1379 aa10.28□□□□□ -0.76
TCF4-208ENST00000543082 LOXHD1Q8IVV2 1947 aa10.28□□□□□ -0.76
TCF4-208ENST00000543082 A0A0G2JND7 137 aa10.28□□□□□ -0.76
TCF4-208ENST00000543082 PIK3CDO00329 1044 aa10.28□□□□□ -0.76
TCF4-208ENST00000543082 P4HA2O15460 535 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms