RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 XBP1P17861 261 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 RRM1P23921 792 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 ARFIP2P53365 341 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PFKPQ01813 784 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 CREMQ03060 361 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PRKG2Q13237 762 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PTK2BQ14289 1009 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 DGKDQ16760 1214 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 MST1LQ2TV78 715 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 FLYWCH1Q4VC44 716 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 FBXO47Q5MNV8 452 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 CNKSR3Q6P9H4 555 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PPP1R3BQ86XI6 285 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 SPPL2CQ8IUH8 684 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PCYOX1LQ8NBM8 494 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 OR6B3Q8NGW1 331 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 CYP2W1Q8TAV3 490 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 FAM71BQ8TC56 605 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 IPO4Q8TEX9 1081 aaKnown RBP4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 TOE1Q96GM8 510 aaKnown RBP4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 SOX7Q9BT81 388 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 CNPPD1Q9BV87 410 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 TRIM54Q9BYV2 358 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 HAPLN2Q9GZV7 340 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 ADAM7Q9H2U9 754 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 KCNK12Q9HB15 430 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 POLR3BQ9NW08 1133 aaPredicted RBP4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 HSPBP1Q9NZL4 362 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 SLC13A4Q9UKG4 626 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 ITGB1BP2Q9UKP3 347 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 WDR97A6NE52 1622 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 POLA1P09884 1462 aaPredicted RBP4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 MYBBP1AQ9BQG0 1328 aaKnown RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 A0A1W2PR48 441 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 FAM234BA2RU67 622 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 TRIM43BA6NCK2 446 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 A6NLC8 198 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 CLCA1A8K7I4 914 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 B4E171 279 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 TISP43B9A030 160 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 B9A039 149 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 NT5C1B-RDH14C9J2C7 533 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 ETV2O00321 342 aaPredicted RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 MAFO75444 373 aaPredicted RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 LY86O95711 162 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 AHSGP02765 367 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 MT-ND5P03915 603 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 CYBBP04839 570 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 LTA4HP09960 611 aaKnown RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 PTMSP20962 102 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 PRDX5P30044 214 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 COPB2P35606 906 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 ZEB1P37275 1124 aaPredicted RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 ARL4AP40617 200 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 TSPAN7P41732 249 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 LIFRP42702 1097 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 FLT3LGP49771 235 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 HK2P52789 917 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 PER3P56645 1201 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 SOX8P57073 446 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 FOXO4P98177 505 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 MAP3K12Q12852 859 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 RAB30Q15771 203 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 NBPF8Q3BBV2 869 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 VASNQ6EMK4 673 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 TEPPQ6URK8 271 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 ABHD15Q6UXT9 468 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 ZNF783Q6ZMS7 281 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 CATSPERGQ6ZRH7 1159 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 Q6ZVL8 140 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 HEATR4Q86WZ0 1026 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 FAM90A1Q86YD7 464 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 FAM126BQ8IXS8 530 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 ADGRG2Q8IZP9 1017 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 PDZD8Q8NEN9 1154 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 PPP1R14CQ8TAE6 165 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 IGDCC4Q8TDY8 1250 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 STYXQ8WUJ0 223 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 MAML1Q92585 1016 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 RUBCNQ92622 972 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 TRIM43Q96BQ3 446 aaPredicted RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 DYDC2Q96IM9 177 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 SERINC2Q96SA4 455 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 UHRF1Q96T88 793 aaPredicted RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 PDCD2LQ9BRP1 358 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 PYM1Q9BRP8 204 aaKnown RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 STK31Q9BXU1 1019 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 SENP6Q9GZR1 1112 aaPredicted RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 MRPL46Q9H2W6 279 aaKnown RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 SRRDQ9UH36 339 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 DBR1Q9UK59 544 aaKnown RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 SMG5Q9UPR3 1016 aaKnown RBP4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 ABCC10Q5T3U5 1492 aa4.55□□□□□ -1.68
SFSWAP-211ENST00000542813 WIZO95785 1651 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 FITM1A5D6W6 292 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 F8W031 263 aaPredicted RBP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 AREL1O15033 823 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 TBC1D4O60343 1298 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SOAT2O75908 522 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms