RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CBFA2T2O43439 604 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 CST3P01034 146 aaPredicted RBP24.89■■□□□ 1.57
HOMER3-205ENST00000542541 HLA-DRAP01903 254 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 ATICP31939 592 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 RABGGTBP53611 331 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 UBXN1Q04323 297 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 CXorf38Q8TB03 319 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 TAF4BQ92750 862 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 ZNF560Q96MR9 790 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 TRIP11Q15643 1979 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 VNN1O95497 513 aa24.88■■□□□ 1.57
HOMER3-205ENST00000542541 BCAR1P56945 870 aa24.88■■□□□ 1.57
HOMER3-205ENST00000542541 RAB30Q15771 203 aa24.88■■□□□ 1.57
HOMER3-205ENST00000542541 FAM109BQ6ICB4 259 aaPredicted RBP24.88■■□□□ 1.57
HOMER3-205ENST00000542541 SARM1Q6SZW1 724 aa24.88■■□□□ 1.57
HOMER3-205ENST00000542541 ZNF558Q96NG5 402 aa24.88■■□□□ 1.57
HOMER3-205ENST00000542541 NAP1L5Q96NT1 182 aaPredicted RBP24.88■■□□□ 1.57
HOMER3-205ENST00000542541 MSRAQ9UJ68 235 aa24.88■■□□□ 1.57
HOMER3-205ENST00000542541 FNDC1Q4ZHG4 1894 aaPredicted RBP24.87■■□□□ 1.57
HOMER3-205ENST00000542541 A0A1W2PPC1 479 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 NRP1O14786 923 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 B4GALT3O60512 393 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 B3GAT3O94766 335 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 GALTP07902 379 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 EXOC3L4Q17RC7 722 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 WDR44Q5JSH3 913 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 EHBP1Q8NDI1 1231 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 HPDLQ96IR7 371 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 IFNKQ9P0W0 207 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 RWDD3Q9Y3V2 267 aa24.87■■□□□ 1.57
HOMER3-205ENST00000542541 SLC11A1P49279 550 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 TAF6P49848 677 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 MYL6P60660 151 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 NR1I3Q14994 352 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 EPC2Q52LR7 807 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 KCNT2Q6UVM3 1135 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 CLP1Q92989 425 aaKnown RBP24.86■■□□□ 1.57
HOMER3-205ENST00000542541 PAAF1Q9BRP4 392 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 GCNT4Q9P109 453 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 HCSTQ9UBK5 93 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 NUB1Q9Y5A7 615 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 PCDHB12Q9Y5F1 795 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 LAMA3Q16787 3333 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 COL4A6Q14031 1691 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 TMEM189-UBE2V1I3L0A0 370 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 CLSTN1O94985 981 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 STAU1O95793 577 aaKnown RBP24.86■■□□□ 1.57
HOMER3-205ENST00000542541 SV2CQ496J9 727 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 TRIM5Q9C035 493 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 CACNG4Q9UBN1 327 aa24.86■■□□□ 1.57
HOMER3-205ENST00000542541 PRG3Q9Y2Y8 225 aaPredicted RBP24.86■■□□□ 1.57
HOMER3-205ENST00000542541 TDRD15B5MCY1 1934 aaKnown RBP24.86■■□□□ 1.57
HOMER3-205ENST00000542541 LILRA4P59901 499 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 ZNF699Q32M78 642 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 TMEM130Q8N3G9 435 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 COLGALT1Q8NBJ5 622 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 RABGGTAQ92696 567 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 SEMA4DQ92854 862 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 ERGIC2Q96RQ1 377 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 CRACR2AQ9BSW2 395 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 VRTNQ9H8Y1 702 aa24.85■■□□□ 1.57
HOMER3-205ENST00000542541 PDCD11Q14690 1871 aaKnown RBP24.85■■□□□ 1.57
HOMER3-205ENST00000542541 LCHNA4D1U4 455 aa24.84■■□□□ 1.57
HOMER3-205ENST00000542541 PPEF2O14830 753 aa24.84■■□□□ 1.57
HOMER3-205ENST00000542541 TRAPPC3O43617 180 aa24.84■■□□□ 1.57
HOMER3-205ENST00000542541 TADA2AO75478 443 aa24.84■■□□□ 1.57
HOMER3-205ENST00000542541 ASS1P00966 412 aaKnown RBP24.84■■□□□ 1.57
HOMER3-205ENST00000542541 PPM1AP35813 382 aa24.84■■□□□ 1.57
HOMER3-205ENST00000542541 GSE1Q14687 1217 aa24.84■■□□□ 1.57
HOMER3-205ENST00000542541 PRPF38BQ5VTL8 546 aaKnown RBP24.84■■□□□ 1.57
HOMER3-205ENST00000542541 XPO4Q9C0E2 1151 aaKnown RBP24.84■■□□□ 1.57
HOMER3-205ENST00000542541 XYLT2Q9H1B5 865 aa24.84■■□□□ 1.57
HOMER3-205ENST00000542541 FSD2A1L4K1 749 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 LINC01553A4QN01 128 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 KPNA7A9QM74 516 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 CA3P07451 260 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 P4HA1P13674 534 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 ZNF667Q5HYK9 610 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 LMO3Q8TAP4 145 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 PBX4Q9BYU1 374 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 INTS2Q9H0H0 1204 aaKnown RBP24.83■■□□□ 1.57
HOMER3-205ENST00000542541 SPG21Q9NZD8 308 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 ADAM28Q9UKQ2 775 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 GBF1Q92538 1859 aa24.83■■□□□ 1.57
HOMER3-205ENST00000542541 A0A1W2PQC6 194 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 TEX33O43247 280 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 KIF4AO95239 1232 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 MYOGP15173 224 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 PON1P27169 355 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 SMAD3P84022 425 aaKnown RBP24.83■■□□□ 1.56
HOMER3-205ENST00000542541 ELAVL2Q12926 359 aaKnown RBP24.83■■□□□ 1.56
HOMER3-205ENST00000542541 WDR72Q3MJ13 1102 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 SCARA3Q6AZY7 606 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 TRIM65Q6PJ69 517 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 C3orf58Q8NDZ4 430 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 FAXDC2Q96IV6 333 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 PCMTD1Q96MG8 357 aaPredicted RBP24.83■■□□□ 1.56
HOMER3-205ENST00000542541 SAMD11Q96NU1 681 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 NT5C1BQ96P26 610 aa24.83■■□□□ 1.56
HOMER3-205ENST00000542541 PI4K2AQ9BTU6 479 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms