RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 RPS8P62241 208 aaKnown RBP10.06□□□□□ -0.8
MRPS35-204ENST00000542199 PKN1Q16512 942 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 KSR2Q6VAB6 950 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 USP50Q70EL3 339 aaPredicted RBP10.06□□□□□ -0.8
MRPS35-204ENST00000542199 OR14C36Q8NHC7 312 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 TEKT5Q96M29 485 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 ADARB2Q9NS39 739 aaKnown RBP10.06□□□□□ -0.8
MRPS35-204ENST00000542199 CWC25Q9NXE8 425 aaPredicted RBP10.06□□□□□ -0.8
MRPS35-204ENST00000542199 ZIM2Q9NZV7 527 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 FBXO10Q9UK96 956 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 DDX60Q8IY21 1712 aaKnown RBP10.06□□□□□ -0.8
MRPS35-204ENST00000542199 CDHR2Q9BYE9 1310 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 COL4A1P02462 1669 aa10.06□□□□□ -0.8
MRPS35-204ENST00000542199 LRRC37AA6NMS7 1700 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 PI4KAP2A4QPH2 592 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 KLHL33A6NCF5 533 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 ANP32CO43423 234 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 CUTAO60888 179 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 RAD17O75943 681 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 HMGCRP04035 888 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 IGKV5-2P06315 115 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 C8AP07357 584 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 ETV4P43268 484 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 GMPSP49915 693 aaPredicted RBP10.05□□□□□ -0.8
MRPS35-204ENST00000542199 SPIDRQ14159 915 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 EIF4HQ15056 248 aaKnown RBP10.05□□□□□ -0.8
MRPS35-204ENST00000542199 CIAPIN1Q6FI81 312 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 LARP4Q71RC2 724 aaKnown RBP eCLIP10.05□□□□□ -0.8
MRPS35-204ENST00000542199 PI4KAP1Q8N8J0 262 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 TXNDC5Q8NBS9 432 aaKnown RBP10.05□□□□□ -0.8
MRPS35-204ENST00000542199 ADAMTS17Q8TE56 1095 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 HIST1H2AHQ96KK5 128 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 HIST1H2AJQ99878 128 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 SAE1Q9UBE0 346 aaPredicted RBP10.05□□□□□ -0.8
MRPS35-204ENST00000542199 POLLQ9UGP5 575 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 IP6K2Q9UHH9 426 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 INVSQ9Y283 1065 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 PTPN22Q9Y2R2 807 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 MAP3K2Q9Y2U5 619 aa10.05□□□□□ -0.8
MRPS35-204ENST00000542199 ABLIM3O94929 683 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 SNUPNO95149 360 aaKnown RBP10.04□□□□□ -0.8
MRPS35-204ENST00000542199 SCGB1D2O95969 90 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 HSPA1AP0DMV8 641 aaKnown RBP10.04□□□□□ -0.8
MRPS35-204ENST00000542199 HSPA1BP0DMV9 641 aaKnown RBP10.04□□□□□ -0.8
MRPS35-204ENST00000542199 KRT85P78386 507 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 GPSM2P81274 684 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 TNIP1Q15025 636 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 NFE2Q16621 373 aaPredicted RBP10.04□□□□□ -0.8
MRPS35-204ENST00000542199 TWISTNBQ3B726 338 aaPredicted RBP10.04□□□□□ -0.8
MRPS35-204ENST00000542199 CCDC152Q4G0S7 254 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 Q6ZUG5 572 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 GPR155Q7Z3F1 870 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 LINC01356Q8N9X3 169 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 TBC1D16Q8TBP0 767 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 STK31Q9BXU1 1019 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 RHOBTB2Q9BYZ6 727 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 KIAA1683Q9H0B3 1180 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 TMEM168Q9H0V1 697 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 IFT122Q9HBG6 1241 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 MRFAP1Q9Y605 127 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 FANCIQ9NVI1 1328 aa10.04□□□□□ -0.8
MRPS35-204ENST00000542199 SEC24DO94855 1032 aaPredicted RBP10.03□□□□□ -0.8
MRPS35-204ENST00000542199 CYP1A1P04798 512 aaPredicted RBP10.03□□□□□ -0.8
MRPS35-204ENST00000542199 ZNF888P0CJ79 500 aaPredicted RBP10.03□□□□□ -0.8
MRPS35-204ENST00000542199 HNRNPLP14866 589 aaKnown RBP eCLIP10.03□□□□□ -0.8
MRPS35-204ENST00000542199 TAF1P21675 1872 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 C5AR1P21730 350 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 RRADP55042 308 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 G2E3Q7L622 706 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 WDR63Q8IWG1 891 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 NKD2Q969F2 451 aaPredicted RBP10.03□□□□□ -0.8
MRPS35-204ENST00000542199 KATNBL1Q9H079 304 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 CDH19Q9H159 772 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 LUC7LQ9NQ29 371 aaKnown RBP10.03□□□□□ -0.8
MRPS35-204ENST00000542199 PGAP2Q9UHJ9 254 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 TUBD1Q9UJT1 453 aa10.03□□□□□ -0.8
MRPS35-204ENST00000542199 PSMD14O00487 310 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 ZRANB2O95218 330 aaKnown RBP eCLIP10.02□□□□□ -0.81
MRPS35-204ENST00000542199 MTHFD2P13995 350 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 RECQLP46063 649 aaPredicted RBP10.02□□□□□ -0.81
MRPS35-204ENST00000542199 ZNF761Q86XN6 746 aaPredicted RBP10.02□□□□□ -0.81
MRPS35-204ENST00000542199 FMNL3Q8IVF7 1028 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 RSAD2Q8WXG1 361 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 DPF2Q92785 391 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 EYA3Q99504 573 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 DBNDD1Q9H9R9 158 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 TCEAL9Q9UHQ7 104 aa10.02□□□□□ -0.81
MRPS35-204ENST00000542199 RTL9Q8NET4 1388 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 MAFGO15525 162 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 MARCH6O60337 910 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 ECE2O60344 883 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 CSF2RBP32927 897 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 GPR15P49685 360 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 CTSWP56202 376 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 MGAT5Q09328 741 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 PPP2R5AQ15172 486 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 DEFB115Q30KQ5 88 aa10.01□□□□□ -0.81
MRPS35-204ENST00000542199 MBNL2Q5VZF2 373 aaKnown RBP10.01□□□□□ -0.81
MRPS35-204ENST00000542199 CST9Q5W186 159 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms