RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 INPP4AQ96PE3 977 aaPredicted RBP17.04■□□□□ 0.32
VARS2-212ENST00000542001 TMEM121Q9BTD3 319 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 ACTR5Q9H9F9 607 aaPredicted RBP17.04■□□□□ 0.32
VARS2-212ENST00000542001 AGO4Q9HCK5 861 aaKnown RBP17.04■□□□□ 0.32
VARS2-212ENST00000542001 ARL4CP56559 192 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 R3HDM1Q15032 1099 aaKnown RBP17.03■□□□□ 0.32
VARS2-212ENST00000542001 GPR162Q16538 588 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 UGCGQ16739 394 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 CCDC14Q49A88 953 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 GMCL1P1Q8NEA9 526 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 PSMD10O75832 226 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 STAMBPO95630 424 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 NLRP11P59045 1033 aaKnown RBP17.03■□□□□ 0.32
VARS2-212ENST00000542001 ACAD10Q6JQN1 1059 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 MOXD1Q6UVY6 613 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 LRRN4Q8WUT4 740 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 PRPF31Q8WWY3 499 aaKnown RBP17.03■□□□□ 0.32
VARS2-212ENST00000542001 FAM81BQ96LP2 452 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 PPP1R36Q96LQ0 422 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 KIAA1586Q9HCI6 787 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 MAGEA4P43358 317 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 CDH8P55286 799 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 BCAR1P56945 870 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 EIF3EP60228 445 aaKnown RBP17.03■□□□□ 0.32
VARS2-212ENST00000542001 KDM7AQ6ZMT4 941 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 RAPH1Q70E73 1250 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 HSD17B14Q9BPX1 270 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 IDI2Q9BXS1 227 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 SNX25Q9H3E2 840 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 NPHS2Q9NP85 383 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 IP6K2Q9UHH9 426 aa17.03■□□□□ 0.32
VARS2-212ENST00000542001 CHUKO15111 745 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 MED7O43513 233 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 PDHA1P08559 390 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 SESN2P58004 480 aaPredicted RBP17.02■□□□□ 0.32
VARS2-212ENST00000542001 HIF1AQ16665 826 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 TMC3Q7Z5M5 1100 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 KIF12Q96FN5 646 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 GPATCH2LQ9NWQ4 482 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 DCDC2CA8MYV0 355 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 LCP1P13796 627 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 PDGFRAP16234 1089 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 GCKP35557 465 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 MYL6P60660 151 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 CRY2Q49AN0 593 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 FAM71DQ8N9W8 422 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 LRRC37BQ96QE4 947 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 LRRC4Q9HBW1 653 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 ERVK-5Q9HDB9 667 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 RAB6BQ9NRW1 208 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 IGSF9BQ9UPX0 1349 aa17.02■□□□□ 0.32
VARS2-212ENST00000542001 CALB1P05937 261 aa17.02■□□□□ 0.31
VARS2-212ENST00000542001 SLC8A1P32418 973 aa17.02■□□□□ 0.31
VARS2-212ENST00000542001 HSPA9P38646 679 aaKnown RBP17.02■□□□□ 0.31
VARS2-212ENST00000542001 TSNAXIP1Q2TAA8 658 aa17.02■□□□□ 0.31
VARS2-212ENST00000542001 LMNTD2Q8IXW0 634 aa17.02■□□□□ 0.31
VARS2-212ENST00000542001 ESRRAP11474 423 aaPredicted RBP17.01■□□□□ 0.31
VARS2-212ENST00000542001 NCF2P19878 526 aaPredicted RBP17.01■□□□□ 0.31
VARS2-212ENST00000542001 RFX1P22670 979 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 NME3Q13232 169 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 PARP9Q8IXQ6 854 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 PARD3BQ8TEW8 1205 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 TRAIPQ9BWF2 469 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 TCRBV7S2A1N4TA0A589 114 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 RBP3P10745 1247 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 CPA2P48052 419 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 JAG1P78504 1218 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 PGM5Q15124 567 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 TAF11Q15544 211 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 DPY19L2Q6NUT2 758 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 ARMC9Q7Z3E5 817 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 SPATA21Q7Z572 469 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 DTX3LQ8TDB6 740 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 ERP27Q96DN0 273 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 SENP7Q9BQF6 1050 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
VARS2-212ENST00000542001 TCF7P36402 384 aaPredicted RBP17.01■□□□□ 0.31
VARS2-212ENST00000542001 C3orf62Q6ZUJ4 267 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 CAVIN3Q969G5 261 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 NEUROG2Q9H2A3 272 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 SMYD3Q9H7B4 428 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 SLC40A1Q9NP59 571 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 COPEO14579 308 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 TBXAS1P24557 533 aaPredicted RBP17.01■□□□□ 0.31
VARS2-212ENST00000542001 STYK1Q6J9G0 422 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 PXMP2Q9NR77 195 aa17.01■□□□□ 0.31
VARS2-212ENST00000542001 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
VARS2-212ENST00000542001 M0R2N6 131 aa17■□□□□ 0.31
VARS2-212ENST00000542001 NDC80O14777 642 aa17■□□□□ 0.31
VARS2-212ENST00000542001 EPS8L1Q8TE68 723 aa17■□□□□ 0.31
VARS2-212ENST00000542001 SLC10A4Q96EP9 437 aa17■□□□□ 0.31
VARS2-212ENST00000542001 PIH1D1Q9NWS0 290 aaKnown RBP17■□□□□ 0.31
VARS2-212ENST00000542001 KCND2Q9NZV8 630 aa17■□□□□ 0.31
VARS2-212ENST00000542001 TOPAZ1Q8N9V7 1692 aa17■□□□□ 0.31
VARS2-212ENST00000542001 KCNN4O15554 427 aa17■□□□□ 0.31
VARS2-212ENST00000542001 CDH16O75309 829 aa17■□□□□ 0.31
VARS2-212ENST00000542001 AGTP01019 485 aa17■□□□□ 0.31
VARS2-212ENST00000542001 ARL4AP40617 200 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms