RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 EDIL3O43854 480 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 TRIM16O95361 564 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 HSP90AA1P07900 732 aaKnown RBP10.8□□□□□ -0.68
CHFR-220ENST00000541817 BRCC3P46736 316 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 CACNB1Q02641 598 aaPredicted RBP10.8□□□□□ -0.68
CHFR-220ENST00000541817 FCHO2Q0JRZ9 810 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 TWF1Q12792 350 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 KARSQ15046 597 aaKnown RBP10.8□□□□□ -0.68
CHFR-220ENST00000541817 LRCH2Q5VUJ6 765 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 PDXDC1Q6P996 788 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 C1orf228Q6PIY5 440 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 CCNI2Q6ZMN8 369 aaPredicted RBP10.8□□□□□ -0.68
CHFR-220ENST00000541817 MICU3Q86XE3 530 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 CAMKK1Q8N5S9 505 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 FANCBQ8NB91 859 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 PIP4K2CQ8TBX8 421 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 PSPC1Q8WXF1 523 aaKnown RBP10.8□□□□□ -0.68
CHFR-220ENST00000541817 ZNF512Q96ME7 567 aaPredicted RBP10.8□□□□□ -0.68
CHFR-220ENST00000541817 DCBLD2Q96PD2 775 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 TEKT3Q9BXF9 490 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 ATG13O75143 517 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 MICAL2O94851 1124 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 PTMSP20962 102 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 JAK3P52333 1124 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 RABEP1Q15276 862 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 AMHR2Q16671 573 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 IQCEQ6IPM2 695 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 CD300LGQ6UXG3 332 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 FRMD1Q8N878 549 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 RPLP0P6Q8NHW5 317 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 ZNF461Q8TAF7 563 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 CHFRQ96EP1 664 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 NUSAP1Q9BXS6 441 aaKnown RBP10.79□□□□□ -0.68
CHFR-220ENST00000541817 PTPRBP23467 1997 aa10.79□□□□□ -0.68
CHFR-220ENST00000541817 URB1O60287 2271 aaKnown RBP10.78□□□□□ -0.68
CHFR-220ENST00000541817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 ANTXRLA6NF34 631 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 DPYSL4O14531 572 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 ATXN7O15265 892 aaPredicted RBP10.78□□□□□ -0.68
CHFR-220ENST00000541817 ABLIM3O94929 683 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 REC8O95072 547 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 APBB3O95704 486 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 CFIP05156 583 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 THP07101 528 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 GSPT1P15170 499 aaKnown RBP10.78□□□□□ -0.68
CHFR-220ENST00000541817 AXLP30530 894 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 SFNP31947 248 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 MCM4P33991 863 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 CYP4F3Q08477 520 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 LMAN2Q12907 356 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 ELAVL2Q12926 359 aaKnown RBP10.78□□□□□ -0.68
CHFR-220ENST00000541817 PSMD2Q13200 908 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 DMC1Q14565 340 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 NAB2Q15742 525 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 TMEM196Q5HYL7 178 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 RTL10Q7L3V2 364 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 FERMT3Q86UX7 667 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 TTC30AQ86WT1 665 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 TMEFF1Q8IYR6 380 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 HACE1Q8IYU2 909 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 ELMOD1Q8N336 334 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 RLN3Q8WXF3 142 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 SLC7A3Q8WY07 619 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 SLC5A5Q92911 643 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 CEP170P1Q96L14 293 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 SMG9Q9H0W8 520 aaKnown RBP10.78□□□□□ -0.68
CHFR-220ENST00000541817 OSBPL3Q9H4L5 887 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 GOLGA2P5Q9HBQ8 144 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 ASAH2Q9NR71 780 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 BARHL2Q9NY43 387 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 BACE2Q9Y5Z0 518 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 SLC12A7Q9Y666 1083 aa10.78□□□□□ -0.68
CHFR-220ENST00000541817 TNRC6BQ9UPQ9 1833 aaKnown RBP10.77□□□□□ -0.68
CHFR-220ENST00000541817 OTOL1A6NHN0 477 aaPredicted RBP10.77□□□□□ -0.69
CHFR-220ENST00000541817 K7ELQ4 463 aaPredicted RBP10.77□□□□□ -0.69
CHFR-220ENST00000541817 EML1O00423 815 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 TBX3O15119 743 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 SH3BP5O60239 455 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 B3GAT3O94766 335 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 FTH1P19P0C7X4 201 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 ATF2P15336 505 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 ITPKBP27987 946 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 CIITAP33076 1130 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 GALK1P51570 392 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 CLCNKBP51801 687 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 PTENP60484 403 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 MBTD1Q05BQ5 628 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 GRSF1Q12849 480 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHFR-220ENST00000541817 TRIP6Q15654 476 aaKnown RBP10.77□□□□□ -0.69
CHFR-220ENST00000541817 ITPRIPL2Q3MIP1 535 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 ARHGAP29Q52LW3 1261 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 GLRA4Q5JXX5 417 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 TRIM68Q6AZZ1 485 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 ANKS3Q6ZW76 656 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 HAUS6Q7Z4H7 955 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 TCEAL8Q8IYN2 117 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 HDDC3Q8N4P3 179 aa10.77□□□□□ -0.69
CHFR-220ENST00000541817 DEFB119Q8N690 84 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms