RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 BZW2Q9Y6E2 419 aaKnown RBP16.38■□□□□ 0.21
CLPTM1-202ENST00000541297 ESYT3A0FGR9 886 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 ZSCAN5CA6NGD5 496 aaPredicted RBP16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 TRPA1O75762 1119 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 PROZP22891 400 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 PSEN2P49810 448 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 CLDN10P78369 228 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 TMEM192Q8IY95 271 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 NFKBIZQ9BYH8 718 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 NFU1Q9UMS0 254 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 CAPN7Q9Y6W3 813 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 NRCAMQ92823 1304 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 PGK1P00558 417 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 CYBAP13498 195 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 RFX1P22670 979 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 TNFRSF8P28908 595 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 PIK3CAP42336 1068 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 ZACNQ401N2 412 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 MFSD14CQ5VZR4 134 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 SPOPLQ6IQ16 392 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 RUFY4Q6ZNE9 571 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 C15orf39Q6ZRI6 1047 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 IFT81Q8WYA0 676 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 NT5C1BQ96P26 610 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 ACP6Q9NPH0 428 aa16.37■□□□□ 0.21
CLPTM1-202ENST00000541297 RRN3P2A6NIE6 340 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 ELNP15502 786 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 GUCY1A3Q02108 690 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 SP3Q02447 781 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 AMHR2Q16671 573 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 B4GALNT4Q76KP1 1039 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 BRSK2Q8IWQ3 736 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 HELQQ8TDG4 1101 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 CDT1Q9H211 546 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 TREHO43280 583 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 VNN1O95497 513 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 HLA-DRAP01903 254 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 CYP2C9P11712 490 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 NAP1L1P55209 391 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 HTRA3P83110 453 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 CFAP58Q5T655 872 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 GLYCTKQ8IVS8 523 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 IQCKQ8N0W5 287 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 DHX38Q92620 1227 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 MYCBPQ99417 103 aaPredicted RBP16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 CGRRF1Q99675 332 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 CDHR5Q9HBB8 845 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 EPB41L5Q9HCM4 733 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 SEPT11Q9NVA2 429 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 CPSF3Q9UKF6 684 aaKnown RBP16.36■□□□□ 0.21
CLPTM1-202ENST00000541297 GPR25O00155 361 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 MYO1FO00160 1098 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 ARF4P18085 180 aaPredicted RBP16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 DNA2P51530 1060 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 GNASQ5JWF2 1037 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 CNPY4Q8N129 248 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 GPATCH11Q8N954 259 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 NAGPAQ9UK23 515 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 TNFSF13BQ9Y275 285 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 Q9Y3F1 56 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 A6NNZ2 444 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 TMCO5BA8MYB1 307 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 DDX3XO00571 662 aaKnown RBP eCLIP16.35■□□□□ 0.212e-24■■■■□ 19.6
CLPTM1-202ENST00000541297 DUSP11O75319 330 aaKnown RBP16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 LSP1P33241 339 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 MFAP3P55082 362 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 PURAQ00577 322 aaKnown RBP16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 GUCY2DQ02846 1103 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 POU5F1BQ06416 359 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 TUBB8Q3ZCM7 444 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 ALKBH5Q6P6C2 394 aaKnown RBP16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 OTUD6BQ8N6M0 293 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 LNX1Q8TBB1 728 aaPredicted RBP16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 SLC20A1Q8WUM9 679 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 DNAJB3Q8WWF6 145 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 MTMR12Q9C0I1 747 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 GDF3Q9NR23 364 aa16.35■□□□□ 0.21
CLPTM1-202ENST00000541297 CASP8AP2Q9UKL3 1982 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 PJA2O43164 708 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 KIAA0754O94854 1291 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 HEXIM1O94992 359 aaKnown RBP16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 CXCL8P10145 99 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 FNTAP49354 379 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 GUCY2FP51841 1108 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 ENPEPQ07075 957 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 CACNB2Q08289 660 aaPredicted RBP16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 KIF22Q14807 665 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 CFAP221Q4G0U5 840 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 GLE1Q53GS7 698 aaKnown RBP16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 PIK3R5Q8WYR1 880 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 NOX5Q96PH1 765 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 OSMRQ99650 979 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms