RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 HIBCHQ6NVY1 386 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 SEPT14Q6ZU15 432 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 CCDC91Q7Z6B0 441 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 UBR7Q8N806 425 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 RMDN2Q96LZ7 410 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 FAM118BQ9BPY3 351 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 KIAA1683Q9H0B3 1180 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ZNF277Q9NRM2 450 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 SCAF8Q9UPN6 1271 aaKnown RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 RIPK3Q9Y572 518 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 WDR46O15213 610 aaKnown RBP10.15□□□□□ -0.78
CNOT4-212ENST00000541284 GARTP22102 1010 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 NOMO3P69849 1222 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 TNIP1Q15025 636 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 DLGAP5Q15398 846 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 SPOPLQ6IQ16 392 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 GPD1LQ8N335 351 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 SLC17A8Q8NDX2 589 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 NOD2Q9HC29 1040 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 MYOZ2Q9NPC6 264 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 GGT7Q9UJ14 662 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 USP15Q9Y4E8 981 aaPredicted RBP10.15□□□□□ -0.78
CNOT4-212ENST00000541284 SLC1A1P43005 524 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 WDR4P57081 412 aaKnown RBP10.15□□□□□ -0.78
CNOT4-212ENST00000541284 MAMLD1Q13495 774 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 LMBRD2Q68DH5 695 aaPredicted RBP10.15□□□□□ -0.78
CNOT4-212ENST00000541284 PLEKHA7Q6IQ23 1121 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 MCF2L2Q86YR7 1114 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 KATNAL2Q8IYT4 538 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 FITM2Q8N6M3 262 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 MOV10L1Q9BXT6 1211 aaKnown RBP10.15□□□□□ -0.78
CNOT4-212ENST00000541284 MLXIPLQ9NP71 852 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 HOMER2Q9NSB8 354 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 MAP3K20Q9NYL2 800 aaKnown RBP10.15□□□□□ -0.78
CNOT4-212ENST00000541284 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 GRID1Q9ULK0 1009 aa10.15□□□□□ -0.78
CNOT4-212ENST00000541284 TULP1O00294 542 aaPredicted RBP10.15□□□□□ -0.79
CNOT4-212ENST00000541284 VIMP08670 466 aaKnown RBP10.15□□□□□ -0.79
CNOT4-212ENST00000541284 SFNP31947 248 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 RTP1P59025 263 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 KRT76Q01546 638 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 CALCOCO2Q13137 446 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 FAM133BQ5BKY9 247 aaKnown RBP10.15□□□□□ -0.79
CNOT4-212ENST00000541284 ENOSF1Q7L5Y1 443 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 TAOK1Q7L7X3 1001 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 DENND1AQ8TEH3 1009 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 TRAIPQ9BWF2 469 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 KMT5AQ9NQR1 393 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 TMOD2Q9NZR1 351 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 EXOC7Q9UPT5 735 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 NAALADL1Q9UQQ1 740 aa10.15□□□□□ -0.79
CNOT4-212ENST00000541284 TRPM7Q96QT4 1865 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ASNSP08243 561 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 TAC1P20366 129 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 CDR1P51861 262 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 DMP1Q13316 513 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 PSMD6Q15008 389 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 CCNG2Q16589 344 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ACCSLQ4AC99 568 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ZBTB41Q5SVQ8 909 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 TRMT1LQ7Z2T5 733 aaKnown RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ZNF677Q86XU0 584 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 CPXCR1Q8N123 301 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ATL2Q8NHH9 583 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 MGARPQ8TDB4 240 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 L3MBTL3Q96JM7 780 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 FAM213AQ9BRX8 229 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 STMN4Q9H169 189 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 EBF2Q9HAK2 575 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ASIC3Q9UHC3 531 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 PCDHB2Q9Y5E7 798 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 PSTPIP1O43586 416 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 MYBL1P10243 752 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ATP4AP20648 1035 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 NLRP11P59045 1033 aaKnown RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 VSIG10LQ86VR7 867 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 MYCBPQ99417 103 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 TAOK3Q9H2K8 898 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 C17orf75Q9HAS0 396 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ARHGEF3Q9NR81 526 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 SAMD15Q9P1V8 674 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 HLA-DRAP01903 254 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 KRT5P13647 590 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ZNF132P52740 706 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 BRDTQ58F21 947 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 MIS18BP1Q6P0N0 1132 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 PHF13Q86YI8 300 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 CCDC60Q8IWA6 550 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ANKS4BQ8N8V4 417 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 RDM1Q8NG50 284 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 ZNF526Q8TF50 670 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 KIFAP3Q92845 792 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 UTP4Q969X6 686 aaKnown RBP10.14□□□□□ -0.79
CNOT4-212ENST00000541284 RMDN3Q96TC7 470 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 VEZTQ9HBM0 779 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 HOMER3Q9NSC5 361 aa10.14□□□□□ -0.79
CNOT4-212ENST00000541284 CNTNAP2Q9UHC6 1331 aa10.13□□□□□ -0.79
CNOT4-212ENST00000541284 ABHD2P08910 425 aa10.13□□□□□ -0.79
CNOT4-212ENST00000541284 NQO1P15559 274 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms