RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 LILRA6Q6PI73 481 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 ELMSAN1Q6PJG2 1045 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 ANKS3Q6ZW76 656 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 EFCAB13Q8IY85 973 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 GPD1LQ8N335 351 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 KIAA0895Q8NCT3 520 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 BEST2Q8NFU1 509 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 SAAL1Q96ER3 474 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 NECTIN4Q96NY8 510 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 CLSTN3Q9BQT9 956 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 FAM213AQ9BRX8 229 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 MAN1C1Q9NR34 630 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 EXOC1Q9NV70 894 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 CGNQ9P2M7 1197 aaKnown RBP14.22□□□□□ -0.13
LTBR-208ENST00000541005 NUB1Q9Y5A7 615 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 ANO9A1A5B4 782 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 I3L4J1 428 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 M0QZQ0 153 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 PIRO00625 290 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 RPL17P18621 184 aaKnown RBP14.21□□□□□ -0.13
LTBR-208ENST00000541005 MCM4P33991 863 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 GUCY2FP51841 1108 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 DPYDQ12882 1025 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 MRPL58Q14197 206 aaKnown RBP14.21□□□□□ -0.13
LTBR-208ENST00000541005 KMT5BQ4FZB7 885 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 C9orf57Q5W0N0 161 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 CES5AQ6NT32 575 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 C15orf39Q6ZRI6 1047 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 CEP57Q86XR8 500 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 C12orf56Q8IXR9 622 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 FMR1NBQ8N0W7 255 aaPredicted RBP14.21□□□□□ -0.13
LTBR-208ENST00000541005 ZSWIM2Q8NEG5 633 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 TMEM174Q8WUU8 243 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 FAM212AQ96EL1 285 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 PHF7Q9BWX1 381 aaPredicted RBP14.21□□□□□ -0.13
LTBR-208ENST00000541005 PLEKHA4Q9H4M7 779 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 CD320Q9NPF0 282 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 AGPAT3Q9NRZ7 376 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 RBAKQ9NYW8 714 aaPredicted RBP14.21□□□□□ -0.13
LTBR-208ENST00000541005 FBXW11Q9UKB1 542 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 PCDHB8Q9UN66 801 aa14.21□□□□□ -0.13
LTBR-208ENST00000541005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.2□□□□□ -0.14
LTBR-208ENST00000541005 LOC730098B7Z3J9 87 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 ADAM12O43184 909 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 TGM5O43548 720 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 TBC1D4O60343 1298 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 RHOBTB3O94955 611 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 ANP32AP39687 249 aaKnown RBP14.2□□□□□ -0.14
LTBR-208ENST00000541005 MTHFRP42898 656 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 WNT7BP56706 349 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 STK4Q13043 487 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 SNW1Q13573 536 aaKnown RBP14.2□□□□□ -0.14
LTBR-208ENST00000541005 RAB33AQ14088 237 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 KNOP1Q1ED39 458 aaKnown RBP14.2□□□□□ -0.14
LTBR-208ENST00000541005 VARS2Q5ST30 1063 aaKnown RBP14.2□□□□□ -0.14
LTBR-208ENST00000541005 RARS2Q5T160 578 aaKnown RBP14.2□□□□□ -0.14
LTBR-208ENST00000541005 SLC8B1Q6J4K2 584 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 KANK3Q6NY19 840 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 CYP26C1Q6V0L0 522 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 HS2ST1Q7LGA3 356 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 GPR149Q86SP6 731 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 GJD3Q8N144 294 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 TMEM130Q8N3G9 435 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 ENGASEQ8NFI3 743 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 GOLGA5Q8TBA6 731 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 CCDC34Q96HJ3 373 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 RIPOR3Q96MK2 946 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 KIAA1586Q9HCI6 787 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 ZDHHC7Q9NXF8 308 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 HSPBP1Q9NZL4 362 aa14.2□□□□□ -0.14
LTBR-208ENST00000541005 PTPRDP23468 1912 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 GOLGA8IPA6NC78 632 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 GOLGA6L4A6NEF3 574 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 GOLGA8JA6NMD2 632 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 PPEF2O14830 753 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 RPN1P04843 607 aaKnown RBP14.19□□□□□ -0.14
LTBR-208ENST00000541005 LILRA4P59901 499 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 FAM160A1Q05DH4 1040 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 KCNB1Q14721 858 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 RSPO2Q6UXX9 243 aaPredicted RBP14.19□□□□□ -0.14
LTBR-208ENST00000541005 RTL10Q7L3V2 364 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 PALB2Q86YC2 1186 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 C12orf76Q8N812 135 aaPredicted RBP14.19□□□□□ -0.14
LTBR-208ENST00000541005 APPL2Q8NEU8 664 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 APOL5Q9BWW9 433 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 PCIF1Q9H4Z3 704 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 DPP3Q9NY33 737 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 DENND4CQ5VZ89 1909 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 TECTAO75443 2155 aa14.19□□□□□ -0.14
LTBR-208ENST00000541005 ZNF233A6NK53 670 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 H7C4K7 107 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 OAZ2O95190 189 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 POU2F2P09086 479 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 TYMPP19971 482 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 HOXA9P31269 272 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 OR1D2P34982 312 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 ATAT1Q5SQI0 421 aa14.18□□□□□ -0.14
LTBR-208ENST00000541005 ZNF280DQ6N043 979 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms