RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 GLUD1P00367 558 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 RPN1P04843 607 aaKnown RBP18.32■□□□□ 0.52
CD9-209ENST00000540891 MCM4P33991 863 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 AARSP49588 968 aaKnown RBP eCLIP18.32■□□□□ 0.52
CD9-209ENST00000540891 CREMQ03060 361 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 PALB2Q86YC2 1186 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 ADHFE1Q8IWW8 467 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 GPD1LQ8N335 351 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 BEST2Q8NFU1 509 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 SUSD3Q96L08 255 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 MAN1C1Q9NR34 630 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 RBAKQ9NYW8 714 aaPredicted RBP18.32■□□□□ 0.52
CD9-209ENST00000540891 PRKAG3Q9UGI9 489 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 ANO9A1A5B4 782 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 C19orf67A6NJJ6 358 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 TNFRSF10AO00220 468 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 PIRO00625 290 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 SYN3O14994 580 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 KIAA0391O15091 583 aaKnown RBP18.31■□□□□ 0.52
CD9-209ENST00000540891 IL18RAPO95256 599 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 C1RP00736 705 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 WEE2P0C1S8 567 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 SPATA31D3P0C874 917 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
CD9-209ENST00000540891 PSMD2Q13200 908 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 MRPL58Q14197 206 aaKnown RBP18.31■□□□□ 0.52
CD9-209ENST00000540891 KNOP1Q1ED39 458 aaKnown RBP18.31■□□□□ 0.52
CD9-209ENST00000540891 VARS2Q5ST30 1063 aaKnown RBP18.31■□□□□ 0.52
CD9-209ENST00000540891 RARS2Q5T160 578 aaKnown RBP18.31■□□□□ 0.52
CD9-209ENST00000540891 C9orf57Q5W0N0 161 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 PDXDC1Q6P996 788 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 SPATA31D4Q6ZUB0 917 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 CBWD2Q8IUF1 395 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 SFXN1Q9H9B4 322 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 HSPBP1Q9NZL4 362 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 BACE2Q9Y5Z0 518 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 C5orf42Q9H799 3197 aa18.31■□□□□ 0.52
CD9-209ENST00000540891 M0QZQ0 153 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 CLIC2O15247 247 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 SPTLC1O15269 473 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 TBC1D4O60343 1298 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 RHOBTB3O94955 611 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 ITIH3Q06033 890 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 CBX2Q14781 532 aaPredicted RBP18.3■□□□□ 0.52
CD9-209ENST00000540891 SCARA3Q6AZY7 606 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 ANKS3Q6ZW76 656 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 GJD3Q8N144 294 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 FAM84AQ96KN4 292 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 PDE11AQ9HCR9 933 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 DPP3Q9NY33 737 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
CD9-209ENST00000540891 GOLGA6L4A6NEF3 574 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 PAPLNO95428 1278 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 OR1D2P34982 312 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 LILRA4P59901 499 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 SNRPFP62306 86 aaKnown RBP18.29■□□□□ 0.52
CD9-209ENST00000540891 FAM160A1Q05DH4 1040 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 RAB33AQ14088 237 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 CES5AQ6NT32 575 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 TMC5Q6UXY8 1006 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 GPR149Q86SP6 731 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 NT5DC4Q86YG4 428 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 C12orf56Q8IXR9 622 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 NOC3LQ8WTT2 800 aaKnown RBP18.29■□□□□ 0.52
CD9-209ENST00000540891 HDAC7Q8WUI4 952 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 KHSRPQ92945 711 aaKnown RBP eCLIP18.29■□□□□ 0.52
CD9-209ENST00000540891 PHF7Q9BWX1 381 aaPredicted RBP18.29■□□□□ 0.52
CD9-209ENST00000540891 KCTD10Q9H3F6 313 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 FBXW11Q9UKB1 542 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 PCDHB8Q9UN66 801 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 CDY1Q9Y6F8 540 aa18.29■□□□□ 0.52
CD9-209ENST00000540891 PTPRJQ12913 1337 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 ZNF233A6NK53 670 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 GADD45BO75293 160 aaPredicted RBP18.28■□□□□ 0.52
CD9-209ENST00000540891 RFPL2O75678 378 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 KCNB1Q14721 858 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 SLC8B1Q6J4K2 584 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 C1orf127Q8N9H9 656 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 KREMEN2Q8NCW0 462 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 CMASQ8NFW8 434 aaPredicted RBP18.28■□□□□ 0.52
CD9-209ENST00000540891 CXorf38Q8TB03 319 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 POMKQ9H5K3 350 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 FBXL5Q9UKA1 691 aa18.28■□□□□ 0.52
CD9-209ENST00000540891 LOC730098B7Z3J9 87 aa18.27■□□□□ 0.52
CD9-209ENST00000540891 CYP2J2P51589 502 aa18.27■□□□□ 0.52
CD9-209ENST00000540891 TFAMQ00059 246 aaKnown RBP18.27■□□□□ 0.52
CD9-209ENST00000540891 PNOCQ13519 176 aa18.27■□□□□ 0.52
CD9-209ENST00000540891 SNRNP35Q16560 246 aaKnown RBP18.27■□□□□ 0.52
CD9-209ENST00000540891 XXYLT1Q8NBI6 393 aa18.27■□□□□ 0.52
CD9-209ENST00000540891 APPL2Q8NEU8 664 aa18.27■□□□□ 0.52
CD9-209ENST00000540891 ZNF707Q96C28 371 aaPredicted RBP18.27■□□□□ 0.52
CD9-209ENST00000540891 BORCS6Q96GS4 357 aa18.27■□□□□ 0.52
CD9-209ENST00000540891 KIAA1586Q9HCI6 787 aa18.27■□□□□ 0.52
CD9-209ENST00000540891 CGNQ9P2M7 1197 aaKnown RBP18.27■□□□□ 0.52
CD9-209ENST00000540891 TIMM13Q9Y5L4 95 aaPredicted RBP18.27■□□□□ 0.52
CD9-209ENST00000540891 CCDC195A0A1B0GUA6 201 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 OAZ2O95190 189 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms