RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, human

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-229	ENST00000540643	AFAP1L2	Q8N4X5	818 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	PYROXD1	Q8WU10	500 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	HTRA1	Q92743	480 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	LRRC39	Q96DD0	335 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	C8orf48	Q96LL4	319 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	TRABD	Q9H4I3	376 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	NEK6	Q9HC98	313 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	ADA2	Q9NZK5	511 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	SLC12A6	Q9UHW9	1150 aa		13.63	□□□□□ -0.23
SFI1-229	ENST00000540643	TRIM49B	A6NDI0	452 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	PODXL	O00592	558 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	FARP2	O94887	1054 aa	Predicted RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	TRIM49	P0CI25	452 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	TRIM49C	P0CI26	452 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	ITGAL	P20701	1170 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	MZF1	P28698	734 aa	Predicted RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	S100A5	P33763	92 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	LRRC63	Q05C16	580 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	COBLL1	Q53SF7	1204 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	ESR2	Q92731	530 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	MAEL	Q96JY0	434 aa	Known RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	TSSK1B	Q9BXA7	367 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	LRMDA	Q9H2I8	198 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	ATP13A3	Q9H7F0	1226 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	IARS2	Q9NSE4	1012 aa	Known RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	PTPRM	P28827	1452 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	SEMA3E	O15041	775 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	EXOC3	O60645	756 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	TCN1	P20061	433 aa	Predicted RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	BCAP31	P51572	246 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	RINT1	Q6NUQ1	792 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	PLEKHM3	Q6ZWE6	761 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	COL23A1	Q86Y22	540 aa	Predicted RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	TSPAN14	Q8NG11	270 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	IMPG2	Q9BZV3	1241 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	REXO4	Q9GZR2	422 aa	Known RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	MCM9	Q9NXL9	1143 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	C16orf96	A6NNT2	1141 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	MYO1D	O94832	1006 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	ANPEP	P15144	967 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	BFSP2	Q13515	415 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	IQSEC1	Q6DN90	963 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	GALNT7	Q86SF2	657 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	CDC26	Q8NHZ8	85 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	ZNF274	Q96GC6	653 aa	Predicted RBP	13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	GDA	Q9Y2T3	454 aa		13.62	□□□□□ -0.23
SFI1-229	ENST00000540643	UBE4B	O95155	1302 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	SIN3B	O75182	1162 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	PRKCB	P05771	671 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	FAM228B	P0C875	321 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	ENTPD1	P49961	510 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	PRPF39	Q86UA1	669 aa	Known RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	STK32C	Q86UX6	486 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	LRRC49	Q8IUZ0	686 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	NELFCD	Q8IXH7	590 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	FITM2	Q8N6M3	262 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	ACMSD	Q8TDX5	336 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	RMND5B	Q96G75	393 aa	Predicted RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	GOLPH3	Q9H4A6	298 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	SP140L	Q9H930	580 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	UVRAG	Q9P2Y5	699 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	TMCC3	Q9ULS5	477 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	SIGLEC1	Q9BZZ2	1709 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	KIAA1210	Q9ULL0	1709 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	PABPN1L	A6NDY0	278 aa	Known RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	TMEM191C	A6NGB0	347 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	GTPBP6	O43824	516 aa	Predicted RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	CDH16	O75309	829 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	PDGFRB	P09619	1106 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	TMEM191B	P0C7N4	346 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	NELFE	P18615	380 aa	Known RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	HIRA	P54198	1017 aa	Predicted RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	MAPK6	Q16659	721 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	C6orf89	Q6UWU4	347 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	BTBD6	Q96KE9	485 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	ABCB10	Q9NRK6	738 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	CNOT8	Q9UFF9	292 aa	Known RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	UST	Q9Y2C2	406 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	STAT1	P42224	750 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	TTC38	Q5R3I4	469 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	ATG16L1	Q676U5	607 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	KRT73	Q86Y46	540 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	MICU2	Q8IYU8	434 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	POC5	Q8NA72	575 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	STARD8	Q92502	1023 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	WWP1	Q9H0M0	922 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	2e-9	■■■■□ 24
SFI1-229	ENST00000540643	GMIP	Q9P107	970 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	PPL	O60437	1756 aa		13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	EDC4	Q6P2E9	1401 aa	Known RBP	13.61	□□□□□ -0.23
SFI1-229	ENST00000540643	LRRC53	A6NM62	1247 aa		13.6	□□□□□ -0.23
SFI1-229	ENST00000540643		A8MXQ7	604 aa		13.6	□□□□□ -0.23
SFI1-229	ENST00000540643	GNG2	P59768	71 aa		13.6	□□□□□ -0.23
SFI1-229	ENST00000540643	PLOD1	Q02809	727 aa	Predicted RBP	13.6	□□□□□ -0.23
SFI1-229	ENST00000540643	CHRNA2	Q15822	529 aa		13.6	□□□□□ -0.23
SFI1-229	ENST00000540643	SPRED3	Q2MJR0	410 aa		13.6	□□□□□ -0.23
SFI1-229	ENST00000540643	FAM117B	Q6P1L5	589 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms