RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CACNA1HO95180 2353 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 WDR27A2RRH5 827 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 MYMKA6NI61 221 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 GAP43P17677 238 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 NTHL1P78549 312 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 SLFN12LQ6IEE8 588 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 ZNF280DQ6N043 979 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 RSAD2Q8WXG1 361 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 DNAJC19Q96DA6 116 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 CDH7Q9ULB5 785 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 STYXL1Q9Y6J8 313 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 NOTCH4Q99466 2003 aa22.8■■□□□ 1.24
CHFR-217ENST00000540537 ARHGEF37A1IGU5 675 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 ANHXE9PGG2 379 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 M0QZQ0 153 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 PPP1R37O75864 691 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 HTR4Q13639 388 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 CTXN3Q4LDR2 81 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 TPGS2Q68CL5 300 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 SLC44A3Q8N4M1 653 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 LINC00301Q8NCQ3 95 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 MFSD1Q9H3U5 465 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 KCNH3Q9ULD8 1083 aa22.79■■□□□ 1.24
CHFR-217ENST00000540537 ANKRD63C9JTQ0 380 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 NARSO43776 548 aaKnown RBP22.78■■□□□ 1.24
CHFR-217ENST00000540537 ATF2P15336 505 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 ANK1P16157 1881 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 ELF1P32519 619 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 STAT6P42226 847 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 AARSP49588 968 aaKnown RBP eCLIP22.78■■□□□ 1.24
CHFR-217ENST00000540537 STK38Q15208 465 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 SPATA1Q5VX52 437 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 ADALQ6DHV7 355 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 ASTLQ6HA08 431 aaPredicted RBP22.78■■□□□ 1.24
CHFR-217ENST00000540537 HSCBQ8IWL3 235 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 TMEM130Q8N3G9 435 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 BEST2Q8NFU1 509 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 ZNF396Q96N95 335 aaPredicted RBP22.78■■□□□ 1.24
CHFR-217ENST00000540537 STRA6Q9BX79 667 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 DNMT3BQ9UBC3 853 aaKnown RBP22.78■■□□□ 1.24
CHFR-217ENST00000540537 FBXL21Q9UKT6 434 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 DERAQ9Y315 318 aa22.78■■□□□ 1.24
CHFR-217ENST00000540537 A0A087X0B3 334 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 SRFP11831 508 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 PDIA4P13667 645 aaKnown RBP22.77■■□□□ 1.24
CHFR-217ENST00000540537 ARPP19P56211 112 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 POU5F1Q01860 360 aaKnown RBP22.77■■□□□ 1.24
CHFR-217ENST00000540537 TCF15Q12870 199 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 PABPC1LQ4VXU2 614 aaKnown RBP22.77■■□□□ 1.24
CHFR-217ENST00000540537 JADE1Q6IE81 842 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 TCEAL8Q8IYN2 117 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 FAM212AQ96EL1 285 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 OXCT2Q9BYC2 517 aaPredicted RBP22.77■■□□□ 1.24
CHFR-217ENST00000540537 ASB7Q9H672 318 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 MRPL44Q9H9J2 332 aaKnown RBP22.77■■□□□ 1.24
CHFR-217ENST00000540537 OLFML3Q9NRN5 406 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 HCFC1R1Q9NWW0 138 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 WNT16Q9UBV4 365 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 AGO2Q9UKV8 859 aaKnown RBP22.77■■□□□ 1.24
CHFR-217ENST00000540537 MAFFQ9ULX9 164 aa22.77■■□□□ 1.24
CHFR-217ENST00000540537 TISP43B9A030 160 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 PRRG1O14668 218 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 SPTLC2O15270 562 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 OAZ2O95190 189 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 LRG1P02750 347 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 PAX3P23760 479 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 ACOT2P49753 483 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 CLCN5P51795 746 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 GUCY2FP51841 1108 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 POSTNQ15063 836 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 TMEM105Q8N8V8 129 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 ITFG1Q8TB96 612 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 FGF13Q92913 245 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 PANK2Q9BZ23 570 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 AVENQ9NQS1 362 aaPredicted RBP22.76■■□□□ 1.23
CHFR-217ENST00000540537 AFF4Q9UHB7 1163 aaKnown RBP22.76■■□□□ 1.23
CHFR-217ENST00000540537 EXOC7Q9UPT5 735 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 NUMBLQ9Y6R0 609 aa22.76■■□□□ 1.23
CHFR-217ENST00000540537 FRMD3A2A2Y4 597 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 PPP6R2O75170 966 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 NFICP08651 508 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 YWHAHQ04917 246 aaPredicted RBP22.75■■□□□ 1.23
CHFR-217ENST00000540537 TMEM132DQ14C87 1099 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 L1TD1Q5T7N2 865 aaKnown RBP22.75■■□□□ 1.23
CHFR-217ENST00000540537 CWF19L1Q69YN2 538 aaKnown RBP22.75■■□□□ 1.23
CHFR-217ENST00000540537 MTSS1LQ765P7 747 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 SIX5Q8N196 739 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 ACCSQ96QU6 501 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 CYP4F11Q9HBI6 524 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 C2CD2Q9Y426 696 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 INSL5Q9Y5Q6 135 aa22.75■■□□□ 1.23
CHFR-217ENST00000540537 GALR2O43603 387 aaPredicted RBP22.74■■□□□ 1.23
CHFR-217ENST00000540537 SEC24AO95486 1093 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 YEATS4O95619 227 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 RHOP08100 348 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 CFHP08603 1231 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 IDEP14735 1019 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 NPR3P17342 541 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 TYMPP19971 482 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 ADSSP30520 456 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms