RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 FAM26FQ5R3K3 315 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 SNX30Q5VWJ9 437 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 DGKHQ86XP1 1220 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 RIOX2Q8IUF8 465 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 SRRM1Q8IYB3 904 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 METTL13Q8N6R0 699 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 OR6J1Q8NGC5 347 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 INPP4AQ96PE3 977 aaPredicted RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 AMNQ9BXJ7 453 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 SH3GLB2Q9NR46 395 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 DNAAF2Q9NVR5 837 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 KBTBD4Q9NVX7 518 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 BZW2Q9Y6E2 419 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 SPEF2Q9C093 1822 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 CAPN9O14815 690 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 ZNF189O75820 626 aaPredicted RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 UNC5CO95185 931 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 ABL2P42684 1182 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 CACNB1Q02641 598 aaPredicted RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 FUT2Q10981 343 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 SHROOM1Q2M3G4 852 aaPredicted RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 HSP90AA5PQ58FG0 334 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 KIAA1755Q5JYT7 1200 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 TRIB2Q92519 343 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 MRRFQ96E11 262 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 C12orf42Q96LP6 360 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 FAM161BQ96MY7 647 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 TMEM237Q96Q45 408 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 ERP44Q9BS26 406 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 TXNRD2Q9NNW7 524 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 ZFP69BQ9UJL9 534 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 FAM187AA6NFU0 413 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 WFS1O76024 890 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 ITGA4P13612 1032 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 MMP13P45452 471 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 KCTD19Q17RG1 926 aaPredicted RBP9.21□□□□□ -0.93
DDB1-217ENST00000540166 ASPRV1Q53RT3 343 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 ACTRT1Q8TDG2 376 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 CYTH2Q99418 400 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 LZTS2Q9BRK4 669 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.21□□□□□ -0.93
DDB1-217ENST00000540166 MSRAQ9UJ68 235 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 COL4A3BPQ9Y5P4 624 aa9.21□□□□□ -0.93
DDB1-217ENST00000540166 A0A087X0T9 212 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 POTEMA6NI47 508 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SUPT20HL2P0C7V6 817 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 FAM228BP0C875 321 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 CCND3P30281 292 aaPredicted RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 CA8P35219 290 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 RNASELQ05823 741 aaKnown RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 BAATQ14032 418 aaPredicted RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 LONRF1Q17RB8 773 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SLC44A4Q53GD3 710 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 UNC13DQ70J99 1090 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SPATA24Q86W54 205 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.21□□□□□ -0.947e-7■■■□□ 19
DDB1-217ENST00000540166 TMEM199Q8N511 208 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 DDX12PQ92771 950 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 ZNF317Q96PQ6 595 aaPredicted RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 PIGSQ96S52 555 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SPZ1Q9BXG8 430 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 METTL5Q9NRN9 209 aaKnown RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 BTBD7Q9P203 1132 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SALL4Q9UJQ4 1053 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 M0QZ92 97 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 PODXLO00592 558 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 POLR2MP0CAP2 368 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 EVX2Q03828 476 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 MCL1Q07820 350 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SEPT6Q14141 434 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 STXBP2Q15833 593 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 SGSM1Q2NKQ1 1148 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 MAP7D1Q3KQU3 841 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 NAALADL2Q58DX5 795 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 WASHC2DQ5SRD0 308 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 RBM12BQ8IXT5 1001 aaKnown RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 ATXN2LQ8WWM7 1075 aaKnown RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 SCG3Q8WXD2 468 aaKnown RBP9.21□□□□□ -0.94
DDB1-217ENST00000540166 SHISA4Q96DD7 197 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 IWS1Q96ST2 819 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 BARHL2Q9NY43 387 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 PCDHA1Q9Y5I3 950 aa9.21□□□□□ -0.94
DDB1-217ENST00000540166 A0A1B0GVG6 124 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 SORBS3O60504 671 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 TXNP10599 105 aaKnown RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 CETN2P41208 172 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ADCY7P51828 1080 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 RTP1P59025 263 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 LRRC63Q05C16 580 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ACVR2BQ13705 512 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 SESTD1Q86VW0 696 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 FBXO25Q8TCJ0 367 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 NSUN6Q8TEA1 469 aaKnown RBP9.2□□□□□ -0.94
DDB1-217ENST00000540166 LZICQ8WZA0 190 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 GLG1Q92896 1179 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 ZNF653Q96CK0 615 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 TMEM47Q9BQJ4 181 aa9.2□□□□□ -0.94
DDB1-217ENST00000540166 PACSIN1Q9BY11 444 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms