RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TMEM63CQ9P1W3 806 aa7.56□□□□□ -1.2
LPCAT3-209ENST00000540060 STK39Q9UEW8 545 aa7.56□□□□□ -1.2
LPCAT3-209ENST00000540060 CTNND2Q9UQB3 1225 aa7.56□□□□□ -1.2
LPCAT3-209ENST00000540060 DENND4AQ7Z401 1863 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 SF3B1O75533 1304 aaKnown RBP eCLIP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 ANO9A1A5B4 782 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 PPEF2O14830 753 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 MAPK13O15264 365 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 AKAP3O75969 853 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 CSPG5O95196 566 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 SOD2P04179 222 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 IGFBP4P22692 258 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 RPL13P26373 211 aaKnown RBP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 RPL9P32969 192 aaKnown RBP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 AARSP49588 968 aaKnown RBP eCLIP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 CLDN10P78369 228 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 PAK1Q13153 545 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 SURF1Q15526 300 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 PTPN14Q15678 1187 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 KLHL40Q2TBA0 621 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 DPCR1Q3MIW9 517 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 TIGD5Q53EQ6 642 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 CCDC183Q5T5S1 534 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 CEP135Q66GS9 1140 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 ANKRD40Q6AI12 368 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 KLHL10Q6JEL2 608 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 TTI2Q6NXR4 508 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 DCLRE1AQ6PJP8 1040 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 WDR49Q8IV35 697 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 VPS52Q8N1B4 723 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 C1orf127Q8N9H9 656 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 OR5B17Q8NGF7 314 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 CXorf38Q8TB03 319 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 NELFBQ8WX92 580 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 KCTD12Q96CX2 325 aaKnown RBP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 DDX27Q96GQ7 796 aaKnown RBP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 DHTKD1Q96HY7 919 aaPredicted RBP7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 CGRRF1Q99675 332 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 TSG101Q99816 390 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 TCF25Q9BQ70 676 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 MKNK1Q9BUB5 465 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 ENTPD7Q9NQZ7 604 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 STXBP5LQ9Y2K9 1186 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 PCDHGC5Q9Y5F6 944 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 UNC80Q8N2C7 3258 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 C2orf16Q68DN1 1984 aa7.55□□□□□ -1.2
LPCAT3-209ENST00000540060 PTPRDP23468 1912 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 BICDL2A1A5D9 508 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 LRRIQ3A6PVS8 624 aaPredicted RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 HIDE1A8MVS5 230 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 I3L4J1 428 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 STK25O00506 426 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 PIRO00625 290 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 SLC16A3O15427 465 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 TADA2AO75478 443 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 B3GAT3O94766 335 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ITGB3P05106 788 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 TMEM191BP0C7N4 346 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 DLATP10515 647 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 CTSAP10619 480 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 PTMSP20962 102 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 BRCC3P46736 316 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 GLUD2P49448 558 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 NLRP12P59046 1061 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 DLG4P78352 724 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 TFAMQ00059 246 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 DSG1Q02413 1049 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ENPEPQ07075 957 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ELAVL2Q12926 359 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 BFSP1Q12934 665 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ADAM9Q13443 819 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 SMC1AQ14683 1233 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 RTP2Q5QGT7 225 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 PLPP4Q5VZY2 271 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 C9orf57Q5W0N0 161 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 PDE12Q6L8Q7 609 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 CAVIN1Q6NZI2 390 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 INTS8Q75QN2 995 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 TAS1R1Q7RTX1 841 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 TMC7Q7Z402 723 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ADGRD2Q7Z7M1 963 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 FAM186BQ8IYM0 893 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 MLKLQ8NB16 471 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 TMC2Q8TDI7 906 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 PARD3BQ8TEW8 1205 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 AUTS2Q8WXX7 1259 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 EEF2KMTQ96G04 330 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 BORCS6Q96GS4 357 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ANKRD36BP1Q96IX9 119 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 SUSD3Q96L08 255 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 B3GALT6Q96L58 329 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 MED15Q96RN5 788 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 FNBP1Q96RU3 617 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms