RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 LMBRD1Q9NUN5 540 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 SNTG2Q9NY99 539 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 ZDHHC3Q9NYG2 299 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 STK39Q9UEW8 545 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 AGO2Q9UKV8 859 aaKnown RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 FRMD4BQ9Y2L6 1034 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 PCDHA5Q9Y5H7 936 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 MYH9P35579 1960 aaKnown RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 A0A0B4J269 797 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 BICDL2A1A5D9 508 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 ARL5CA6NH57 179 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF233A6NK53 670 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PDXKO00764 312 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 EXOC3O60645 756 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 CLSTN1O94985 981 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 IL18RAPO95256 599 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 POMCP01189 267 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PIGRP01833 764 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 RB1P06400 928 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PPM1AP35813 382 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 MLH1P40692 756 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PLA2G4AP47712 749 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 HTRA4P83105 476 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 POU5F1Q01860 360 aaKnown RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 STK4Q13043 487 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 SURF1Q15526 300 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 TEAD4Q15561 434 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PTPROQ16827 1216 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 TCTN1Q2MV58 587 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 EFHC2Q5JST6 749 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 UBXN11Q5T124 520 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 ISM2Q6H9L7 571 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 TMCO2Q7Z6W1 182 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 GPD1LQ8N335 351 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 GUF1Q8N442 669 aaKnown RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 XXYLT1Q8NBI6 393 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 SMG8Q8ND04 991 aaKnown RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 CACTINQ8WUQ7 758 aaKnown RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 LINC01599Q8WXQ3 324 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 LPPQ93052 612 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PPP2R3CQ969Q6 453 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 VWCEQ96DN2 955 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF558Q96NG5 402 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 FNBP1Q96RU3 617 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 GAD1Q99259 594 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 FAM213AQ9BRX8 229 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 C11orf84Q9BUA3 381 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 COLEC11Q9BWP8 271 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PLVAPQ9BX97 442 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 COL25A1Q9BXS0 654 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 CDT1Q9H211 546 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 CRISPLD1Q9H336 500 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 PRO3102Q9H379 93 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 CLSTN2Q9H4D0 955 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF576Q9H609 170 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 TYW1Q9NV66 732 aaKnown RBP7.03□□□□□ -1.28
SNHG1-212ENST00000539975 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 MTUS1Q9ULD2 1270 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 MAPK8IP1Q9UQF2 711 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 USP20Q9Y2K6 914 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 FAN1Q9Y2M0 1017 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 HES2Q9Y543 173 aa7.03□□□□□ -1.28
SNHG1-212ENST00000539975 KAT6AQ92794 2004 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 ANKRD63C9JTQ0 380 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 BIN1O00499 593 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 CETN3O15182 167 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 TRAPPC3O43617 180 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 KLRC4O43908 158 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 EXTL3O43909 919 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 ZC3H11AO75152 810 aaKnown RBP eCLIP7.02□□□□□ -1.291e-6■■□□□ 11.7
SNHG1-212ENST00000539975 TADA2AO75478 443 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 OFD1O75665 1012 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 RECQL4O94761 1208 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 KRT13P13646 458 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 PROZP22891 400 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 CA8P35219 290 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 CTNNB1P35222 781 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 BMPR1AP36894 532 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 OR1G1P47890 313 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 ACOT2P49753 483 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 CYP2J2P51589 502 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 CASP5P51878 434 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 GRIK3Q13003 919 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 MYBPC2Q14324 1141 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 BMT2Q1RMZ1 405 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 CCDC183Q5T5S1 534 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 EEF1DP3Q658K8 133 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 FAM109BQ6ICB4 259 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-212ENST00000539975 KIAA1841Q6NSI8 718 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 AGMOQ6ZNB7 445 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 EPM2AIP1Q7L775 607 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-212ENST00000539975 SLC9A9Q8IVB4 645 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 TMEM192Q8IY95 271 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 MLKLQ8NB16 471 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 BEST2Q8NFU1 509 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 MICAL1Q8TDZ2 1067 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 SCFD1Q8WVM8 642 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 ARNTL2Q8WYA1 636 aa7.02□□□□□ -1.29
SNHG1-212ENST00000539975 ZNF689Q96CS4 500 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms