RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PLD1Q13393 1074 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 DHX8Q14562 1220 aaKnown RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 MLF2Q15773 248 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 SLC10A6Q3KNW5 377 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 CD300LGQ6UXG3 332 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 RSPO2Q6UXX9 243 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 CD302Q8IX05 232 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 DDX12PQ92771 950 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 ZBTB45Q96K62 511 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 ZNF512Q96ME7 567 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 TBC1D32Q96NH3 1257 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 KXD1Q9BQD3 176 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 CORO1BQ9BR76 489 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 AFF4Q9UHB7 1163 aaKnown RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 MRPS17Q9Y2R5 130 aaKnown RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 INSL5Q9Y5Q6 135 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 KANSL1LA0AUZ9 987 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 DCNP07585 359 aaKnown RBP16.65■□□□□ 0.26
UBE3B-211ENST00000539843 TXLNAP40222 546 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 STARD6P59095 220 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 ADCY1Q08828 1119 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
UBE3B-211ENST00000539843 SEZ6Q53EL9 994 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 DSTYKQ6XUX3 929 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 ASCL5Q7RTU5 278 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 MCRS1Q96EZ8 462 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 REEP2Q9BRK0 252 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 ASAH2Q9NR71 780 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 CCDC39Q9UFE4 941 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 TBX20Q9UMR3 447 aa16.65■□□□□ 0.26
UBE3B-211ENST00000539843 OGTO15294 1046 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 TRAK2O60296 914 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 MICAL2O94851 1124 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 SLC44A4Q53GD3 710 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 C1orf210Q8IVY1 113 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 KRI1Q8N9T8 703 aaKnown RBP16.64■□□□□ 0.25
UBE3B-211ENST00000539843 ST13P5Q8NFI4 369 aaPredicted RBP16.64■□□□□ 0.25
UBE3B-211ENST00000539843 LARP4BQ92615 738 aaKnown RBP16.64■□□□□ 0.25
UBE3B-211ENST00000539843 KCNN1Q92952 543 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 NELL2Q99435 816 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 MSTO1Q9BUK6 570 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 ZFP14Q9HCL3 533 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 TUBGCP4Q9UGJ1 667 aa16.64■□□□□ 0.25
UBE3B-211ENST00000539843 NPHP3-ACAD11A0A0J9YXS1 232 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 VPS37CA5D8V6 355 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-211ENST00000539843 OR6C75A6NL08 312 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 PLCG1P19174 1290 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 IGFBP6P24592 240 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-211ENST00000539843 LRPAP1P30533 357 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 MRPL58Q14197 206 aaKnown RBP16.63■□□□□ 0.25
UBE3B-211ENST00000539843 ARMCX5Q6P1M9 558 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 RAD54LQ92698 747 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 DNASE1L2Q92874 299 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 ELSPBP1Q96BH3 223 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 FAM212AQ96EL1 285 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 RPP25Q9BUL9 199 aaKnown RBP16.63■□□□□ 0.25
UBE3B-211ENST00000539843 OSBPL6Q9BZF3 934 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 FOXQ1Q9C009 403 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 DOCK8Q8NF50 2099 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 WDFY4Q6ZS81 3184 aa16.63■□□□□ 0.25
UBE3B-211ENST00000539843 VWA8A3KMH1 1905 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 ZFHX2Q9C0A1 2572 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-211ENST00000539843 TTC26A0AVF1 554 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 LAMTOR5O43504 91 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 TBC1D4O60343 1298 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 PIGRP01833 764 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 LMNAP02545 664 aaKnown RBP16.62■□□□□ 0.25
UBE3B-211ENST00000539843 ODC1P11926 461 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 CEBPBP17676 345 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 ALDH1A3P47895 512 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 TWF1Q12792 350 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 SF3A1Q15459 793 aaKnown RBP16.62■□□□□ 0.25
UBE3B-211ENST00000539843 ARSHQ5FYA8 562 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 ZBTB41Q5SVQ8 909 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 ZNF852Q6ZMS4 543 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 ADSSL1Q8N142 457 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 BORCS6Q96GS4 357 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 HINFPQ9BQA5 517 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 GPR88Q9GZN0 384 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 SLITRK6Q9H5Y7 841 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 BRD9Q9H8M2 597 aa16.62■□□□□ 0.25
UBE3B-211ENST00000539843 SPATA6Q9NWH7 488 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-211ENST00000539843 M0QZQ0 153 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 OAZ2O95190 189 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 MYL4P12829 197 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 ZNF131P52739 623 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 EPHB3P54753 998 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 SPAG1Q07617 926 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 MCM6Q14566 821 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 KARSQ15046 597 aaKnown RBP16.61■□□□□ 0.25
UBE3B-211ENST00000539843 SLC5A9Q2M3M2 681 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 OVOS1Q6IE37 1185 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 TPRG1Q6ZUI0 275 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 IRF7Q92985 503 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 E2F7Q96AV8 911 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms