RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 METTL23Q86XA0 190 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 NPAS4Q8IUM7 802 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 SHC3Q92529 594 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 TNIP3Q96KP6 325 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 NXF3Q9H4D5 531 aaKnown RBP12.64□□□□□ -0.39
VTN-202ENST00000539746 NHEJ1Q9H9Q4 299 aaPredicted RBP12.64□□□□□ -0.39
VTN-202ENST00000539746 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 KIAA0355O15063 1070 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 NDUFA10O95299 355 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 LSM8O95777 96 aaKnown RBP12.63□□□□□ -0.39
VTN-202ENST00000539746 TIMP1P01033 207 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 MYCP01106 439 aaPredicted RBP12.63□□□□□ -0.39
VTN-202ENST00000539746 AMHP03971 560 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 ITGB3P05106 788 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 KRT5P13647 590 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 TNFAIP3P21580 790 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 USP8P40818 1118 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 FAM189BP81408 668 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 RNASELQ05823 741 aaKnown RBP12.63□□□□□ -0.39
VTN-202ENST00000539746 TUSC3Q13454 348 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 WDR72Q3MJ13 1102 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 TRIM60Q495X7 471 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 IQCEQ6IPM2 695 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 ZNF662Q6ZS27 426 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 ECHDC2Q86YB7 292 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 FAM71AQ8IYT1 594 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 LMO3Q8TAP4 145 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 BAP1Q92560 729 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 PAWRQ96IZ0 340 aaKnown RBP12.63□□□□□ -0.39
VTN-202ENST00000539746 ALS2CR12Q96Q35 445 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.63□□□□□ -0.39
VTN-202ENST00000539746 APOL6Q9BWW8 343 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 EIF2AQ9BY44 585 aaKnown RBP12.63□□□□□ -0.39
VTN-202ENST00000539746 ZNF518BQ9C0D4 1074 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 HAPLN2Q9GZV7 340 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 AGAP1Q9UPQ3 857 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 FHOD1Q9Y613 1164 aa12.63□□□□□ -0.39
VTN-202ENST00000539746 EPN1Q9Y6I3 576 aaPredicted RBP12.63□□□□□ -0.39
VTN-202ENST00000539746 KIF5CO60282 957 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 NOL4O94818 638 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 NFICP08651 508 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 MYBL1P10243 752 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 FGFR4P22455 802 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 POLR2BP30876 1174 aaKnown RBP12.62□□□□□ -0.39
VTN-202ENST00000539746 LHX1P48742 406 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
VTN-202ENST00000539746 FAAP100Q0VG06 881 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 MAPRE1Q15691 268 aaKnown RBP12.62□□□□□ -0.39
VTN-202ENST00000539746 SLC18A3Q16572 532 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 ARHGAP44Q17R89 818 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 TOP6BLQ8N6T0 577 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 APPL2Q8NEU8 664 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
VTN-202ENST00000539746 MCOLN1Q9GZU1 580 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 IKZF4Q9H2S9 585 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 SIX2Q9NPC8 291 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 TMEM51Q9NW97 253 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 GDAP2Q9NXN4 497 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 TBX21Q9UL17 535 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 PCDHB4Q9Y5E5 795 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 EVPLQ92817 2033 aa12.62□□□□□ -0.39
VTN-202ENST00000539746 ARL5CA6NH57 179 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 C9IYK1 514 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 ZNF500O60304 480 aaPredicted RBP12.61□□□□□ -0.39
VTN-202ENST00000539746 EVI5O60447 810 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 TACC1O75410 805 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 EDN1P05305 212 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 ODC1P11926 461 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 GZMAP12544 262 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 PCSK1P29120 753 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 KIF11P52732 1056 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 CCZ1BP86790 482 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 CCZ1P86791 482 aaPredicted RBP12.61□□□□□ -0.39
VTN-202ENST00000539746 TUBB2AQ13885 445 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 PHLDB3Q6NSJ2 640 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 PSRC1Q6PGN9 363 aaPredicted RBP12.61□□□□□ -0.39
VTN-202ENST00000539746 DCLRE1AQ6PJP8 1040 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 RNF10Q8N5U6 811 aaKnown RBP12.61□□□□□ -0.39
VTN-202ENST00000539746 C1orf127Q8N9H9 656 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 RNF169Q8NCN4 708 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 SMG8Q8ND04 991 aaKnown RBP12.61□□□□□ -0.39
VTN-202ENST00000539746 OR5B17Q8NGF7 314 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 KIAA1524Q8TCG1 905 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 PLEKHO2Q8TD55 490 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 HELQQ8TDG4 1101 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 TMEM175Q9BSA9 504 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 TUBB2BQ9BVA1 445 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 SNX25Q9H3E2 840 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
VTN-202ENST00000539746 AAASQ9NRG9 546 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 CNTN6Q9UQ52 1028 aa12.61□□□□□ -0.39
VTN-202ENST00000539746 KPNA7A9QM74 516 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms