RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 C9orf57Q5W0N0 161 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 LILRA6Q6PI73 481 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 TMC5Q6UXY8 1006 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.62□□□□□ -0.55
HMGA2-209ENST00000539662 BRSK2Q8IWQ3 736 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 SMYD4Q8IYR2 804 aaPredicted RBP11.62□□□□□ -0.55
HMGA2-209ENST00000539662 GPD1LQ8N335 351 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 CXorf38Q8TB03 319 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 PLEKHO2Q8TD55 490 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 PIK3R5Q8WYR1 880 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 SUSD6Q92537 303 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 CASP10Q92851 521 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 FBXL18Q96ME1 805 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 POP1Q99575 1024 aaKnown RBP11.62□□□□□ -0.55
HMGA2-209ENST00000539662 EMILIN2Q9BXX0 1053 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 MAN1C1Q9NR34 630 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 EXOC1Q9NV70 894 aa11.62□□□□□ -0.55
HMGA2-209ENST00000539662 RBAKQ9NYW8 714 aaPredicted RBP11.62□□□□□ -0.55
HMGA2-209ENST00000539662 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
HMGA2-209ENST00000539662 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 PIRO00625 290 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 TBC1D4O60343 1298 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 CYP3A5P20815 502 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 SP100P23497 879 aaPredicted RBP11.61□□□□□ -0.55
HMGA2-209ENST00000539662 MCM4P33991 863 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 OR1D2P34982 312 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGA2-209ENST00000539662 ZP2Q05996 745 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 BMS1Q14692 1282 aaKnown RBP11.61□□□□□ -0.55
HMGA2-209ENST00000539662 KYAT1Q16773 422 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 KNOP1Q1ED39 458 aaKnown RBP11.61□□□□□ -0.55
HMGA2-209ENST00000539662 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
HMGA2-209ENST00000539662 TMEM87AQ8NBN3 555 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 OR5B17Q8NGF7 314 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 BORCS6Q96GS4 357 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 SUSD3Q96L08 255 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 KCTD10Q9H3F6 313 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 ASB7Q9H672 318 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 DPP3Q9NY33 737 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 CHMP5Q9NZZ3 219 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 FNIP2Q9P278 1114 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 MTRRQ9UBK8 725 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 NUB1Q9Y5A7 615 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 CDY1Q9Y6F8 540 aa11.61□□□□□ -0.55
HMGA2-209ENST00000539662 DENND4AQ7Z401 1863 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 GOLGA6L4A6NEF3 574 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 RHOBTB3O94955 611 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 GLUD1P00367 558 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 ADH1AP07327 375 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 CASP4P49662 377 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 LILRA4P59901 499 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 TFAMQ00059 246 aaKnown RBP11.6□□□□□ -0.55
HMGA2-209ENST00000539662 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 ELAVL2Q12926 359 aaKnown RBP11.6□□□□□ -0.55
HMGA2-209ENST00000539662 MRPL58Q14197 206 aaKnown RBP11.6□□□□□ -0.55
HMGA2-209ENST00000539662 STXBP4Q6ZWJ1 553 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 CD302Q8IX05 232 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 C1orf127Q8N9H9 656 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 ZNF707Q96C28 371 aaPredicted RBP11.6□□□□□ -0.55
HMGA2-209ENST00000539662 TMEM209Q96SK2 561 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 ADAM7Q9H2U9 754 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 POMKQ9H5K3 350 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 STK39Q9UEW8 545 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 SIX4Q9UIU6 781 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 C2CD2Q9Y426 696 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 UBE4BO95155 1302 aa11.6□□□□□ -0.55
HMGA2-209ENST00000539662 TRIOO75962 3097 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 WDR27A2RRH5 827 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 M0QZQ0 153 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 IL18RAPO95256 599 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 VNN2O95498 520 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 LDHAP00338 332 aaKnown RBP11.59□□□□□ -0.55
HMGA2-209ENST00000539662 ITGB3P05106 788 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 OR4Q2P0C623 313 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
HMGA2-209ENST00000539662 ARPP19P56211 112 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 PSMD2Q13200 908 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 SNRNP35Q16560 246 aaKnown RBP11.59□□□□□ -0.55
HMGA2-209ENST00000539662 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
HMGA2-209ENST00000539662 ISM2Q6H9L7 571 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 PPFIBP1Q86W92 1011 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 GPR65Q8IYL9 337 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 KREMEN2Q8NCW0 462 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 BEST2Q8NFU1 509 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 ZNF516Q92618 1163 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 ELMO3Q96BJ8 720 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 CCDC127Q96BQ5 260 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 SENP8Q96LD8 212 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 MTMR12Q9C0I1 747 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.59□□□□□ -0.55
HMGA2-209ENST00000539662 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 FBXL5Q9UKA1 691 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 SSX2IPQ9Y2D8 614 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 DERAQ9Y315 318 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 PCDHA5Q9Y5H7 936 aa11.59□□□□□ -0.55
HMGA2-209ENST00000539662 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 ZNF233A6NK53 670 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms