RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZNF720Q7Z2F6 126 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SLC44A3Q8N4M1 653 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 APPL2Q8NEU8 664 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ZNF461Q8TAF7 563 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 MRPL44Q9H9J2 332 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 TFIP11Q9UBB9 837 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 DNMT3BQ9UBC3 853 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 CPSF3Q9UKF6 684 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PCDHB8Q9UN66 801 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 MORC2Q9Y6X9 1032 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 DOCK6Q96HP0 2047 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 DOCK8Q8NF50 2099 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PRRG1O14668 218 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ABLIM3O94929 683 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 CFHP08603 1231 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 CYP3A5P20815 502 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ELF1P32519 619 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 TCF15Q12870 199 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ADALQ6DHV7 355 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ZNF280DQ6N043 979 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ALYREFQ86V81 257 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 HSCBQ8IWL3 235 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SIX5Q8N196 739 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PDILTQ8N807 584 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 TMEM105Q8N8V8 129 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FLCNQ8NFG4 579 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 DNAJC19Q96DA6 116 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PRRX2Q99811 253 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ST6GALNAC4Q9H4F1 302 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 CYP4F11Q9HBI6 524 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 CDH7Q9ULB5 785 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 TIMM13Q9Y5L4 95 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 NUMBLQ9Y6R0 609 aa20.72■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ANHXE9PGG2 379 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PPEF2O14830 753 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 XPOTO43592 962 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SEC24AO95486 1093 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ADRB2P07550 413 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 NFICP08651 508 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 POU2F2P09086 479 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 IDEP14735 1019 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PTPN5P54829 565 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 KCNA1Q09470 495 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 HTR4Q13639 388 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PABPC1LQ4VXU2 614 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ASTLQ6HA08 431 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 LINC00301Q8NCQ3 95 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FGF13Q92913 245 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 NXPE3Q969Y0 559 aa20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 AGO2Q9UKV8 859 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1A-212ENST00000539372 M0QZQ0 153 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 SPTLC2O15270 562 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 PPP1R37O75864 691 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 LRG1P02750 347 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 ATF2P15336 505 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 GAP43P17677 238 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 FOXD4L6Q3SYB3 417 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 SPATA1Q5VX52 437 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 CWF19L1Q69YN2 538 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 SLFN12LQ6IEE8 588 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 FOXD4L3Q6VB84 417 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 DSTYKQ6XUX3 929 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 RTL10Q7L3V2 364 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 CD302Q8IX05 232 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 BEST2Q8NFU1 509 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 ING5Q8WYH8 240 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 POMGNT1Q8WZA1 660 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 ZNF396Q96N95 335 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 RPP25Q9BUL9 199 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 SEL1LQ9UBV2 794 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 STYXL1Q9Y6J8 313 aa20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 ZFP37Q9Y6Q3 630 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-212ENST00000539372 ARHGEF37A1IGU5 675 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 TULP1O00294 542 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 GCNT3O95395 438 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 HSP90AA1P07900 732 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 RHOP08100 348 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 SRFP11831 508 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 NPR3P17342 541 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 AARSP49588 968 aaKnown RBP eCLIP20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 CASP5P51878 434 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 YWHAHQ04917 246 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 ADCY1Q08828 1119 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 TMEM132DQ14C87 1099 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 PARM1Q6UWI2 310 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 TCEAL8Q8IYN2 117 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 FGF14Q92915 247 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 HVCN1Q96D96 273 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 TSPAN18Q96SJ8 248 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 PHOX2BQ99453 314 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 STRA6Q9BX79 667 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 FGFBP2Q9BYJ0 223 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 CA14Q9ULX7 337 aa20.69■□□□□ 0.9
TNFRSF1A-212ENST00000539372 OR4Q2P0C623 313 aa20.68■□□□□ 0.9
TNFRSF1A-212ENST00000539372 CPB1P15086 417 aa20.68■□□□□ 0.9
TNFRSF1A-212ENST00000539372 ADSSP30520 456 aa20.68■□□□□ 0.9
TNFRSF1A-212ENST00000539372 SLC5A9Q2M3M2 681 aa20.68■□□□□ 0.9
TNFRSF1A-212ENST00000539372 L1TD1Q5T7N2 865 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1A-212ENST00000539372 C9orf57Q5W0N0 161 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms